RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 CACNA2D1P54289 1103 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 CDH8P55286 799 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 USP46P62068 366 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 CYP27A1Q02318 531 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 TRPC3Q13507 836 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 NFIL3Q16649 462 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 ZACNQ401N2 412 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 MDH1BQ5I0G3 518 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 TRIM68Q6AZZ1 485 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 TSSK4Q6SA08 328 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 VSTM1Q6UX27 236 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 C4orf50Q6ZRC1 276 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 RBM43Q6ZSC3 357 aaKnown RBP6.21□□□□□ -1.42
RNF4-217ENST00000511892 SCN4BQ8IWT1 228 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 YAF2Q8IY57 180 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 CELF5Q8N6W0 485 aaKnown RBP6.21□□□□□ -1.42
RNF4-217ENST00000511892 BPIFB1Q8TDL5 484 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 CSGALNACT1Q8TDX6 532 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 PCED1BQ96HM7 432 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 SPATA17Q96L03 361 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 GCNAQ96QF7 691 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 FAM83CQ9BQN1 747 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 B3GNT5Q9BYG0 378 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 CHRDQ9H2X0 955 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 SNX25Q9H3E2 840 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 CLSTN2Q9H4D0 955 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 SMYD3Q9H7B4 428 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 HPS4Q9NQG7 708 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 PRMT8Q9NR22 394 aaPredicted RBP6.21□□□□□ -1.42
RNF4-217ENST00000511892 GKN1Q9NS71 199 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 TDP1Q9NUW8 608 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 C2orf42Q9NWW7 574 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 GCNT4Q9P109 453 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 UXTQ9UBK9 157 aaPredicted RBP6.21□□□□□ -1.42
RNF4-217ENST00000511892 NXF1Q9UBU9 619 aaKnown RBP6.21□□□□□ -1.42
RNF4-217ENST00000511892 ZMYM5Q9UJ78 669 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 FBXO4Q9UKT5 387 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 TRAF3IP3Q9Y228 551 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 MRPS17Q9Y2R5 130 aaKnown RBP6.21□□□□□ -1.42
RNF4-217ENST00000511892 NUP205Q92621 2012 aa6.21□□□□□ -1.42
RNF4-217ENST00000511892 ABCA7Q8IZY2 2146 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 C2orf78A6NCI8 922 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 A8MXQ7 604 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 F8VP50 259 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 SPECC1L-ADORA2AF8WAN1 911 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 CLDN5O00501 218 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 MAPK13O15264 365 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 CALUO43852 315 aaPredicted RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 LILRB5O75023 590 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 PHACTR2O75167 634 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 AKAP3O75969 853 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 LMNAP02545 664 aaKnown RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 TRIM49P0CI25 452 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 TRIM49CP0CI26 452 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 ARSAP15289 507 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 HOXC13P31276 330 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 AVPR1AP37288 418 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 GRIK1P39086 918 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 KPNA1P52294 538 aaPredicted RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 AP3M2P53677 418 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 MCCD1P59942 119 aaPredicted RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 TNNC1P63316 161 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 NOP14P78316 857 aaKnown RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 ZXDBP98169 803 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 PLCB2Q00722 1185 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 SATB1Q01826 763 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 CSTF1Q05048 431 aaKnown RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 FAM160A1Q05DH4 1040 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 PPP3CAQ08209 521 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 BIRC3Q13489 604 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 NCOA4Q13772 614 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 CCINQ13939 588 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 ZNF268Q14587 947 aaPredicted RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 KCNB1Q14721 858 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 PON2Q15165 354 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 MAPRE1Q15691 268 aaKnown RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 ZNF77Q15935 545 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 ZNF699Q32M78 642 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 ITPRIPL2Q3MIP1 535 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 ZCWPW2Q504Y3 356 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 HS1BP3Q53T59 392 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 CEP135Q66GS9 1140 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 SCARA5Q6ZMJ2 495 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 Q6ZS52 159 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 PAQR9Q6ZVX9 377 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 SV2AQ7L0J3 742 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 RALGPS2Q86X27 583 aaPredicted RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 ELOA2Q8IYF1 753 aaPredicted RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 SMYD4Q8IYR2 804 aaPredicted RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 FMR1NBQ8N0W7 255 aaPredicted RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 ADSSL1Q8N142 457 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 GUF1Q8N442 669 aaKnown RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 ARL14EPQ8N8R7 260 aaPredicted RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 SUMF1Q8NBK3 374 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 ZBTB44Q8NCP5 570 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 B3GALNT2Q8NCR0 500 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 ENGASEQ8NFI3 743 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 OR6B3Q8NGW1 331 aa6.2□□□□□ -1.42
RNF4-217ENST00000511892 MRPS31Q92665 395 aaKnown RBP6.2□□□□□ -1.42
RNF4-217ENST00000511892 MSANTD3Q96H12 275 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms