RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 RHBDF2Q6PJF5 856 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 ZNF605Q86T29 641 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 SLC41A1Q8IVJ1 513 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 SFTPA1Q8IWL2 248 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 TMEM86AQ8N2M4 240 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 NECAB1Q8N987 351 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 SYT2Q8N9I0 419 aaPredicted RBP12.41□□□□□ -0.42
RNF4-216ENST00000511859 FOXJ1Q92949 421 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 FUBP3Q96I24 572 aaKnown RBP eCLIP12.41□□□□□ -0.42
RNF4-216ENST00000511859 GTF3C4Q9UKN8 822 aa12.41□□□□□ -0.42
RNF4-216ENST00000511859 TENM4Q6N022 2769 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 TBC1D3BA6NDS4 549 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 ATXN7O15265 892 aaPredicted RBP12.4□□□□□ -0.42
RNF4-216ENST00000511859 DKK1O94907 266 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 PRB1P04280 392 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 ZNF883P0CG24 379 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 FOSBP53539 338 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 MYL7Q01449 175 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 MESP2Q0VG99 397 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 ME3Q16798 604 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 INTS6LQ5JSJ4 861 aaKnown RBP12.4□□□□□ -0.42
RNF4-216ENST00000511859 KCNK18Q7Z418 384 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 NT5DC4Q86YG4 428 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 SPATA2LQ8IUW3 424 aaPredicted RBP12.4□□□□□ -0.42
RNF4-216ENST00000511859 PDCD7Q8N8D1 485 aaKnown RBP12.4□□□□□ -0.42
RNF4-216ENST00000511859 ZNF513Q8N8E2 541 aaPredicted RBP12.4□□□□□ -0.42
RNF4-216ENST00000511859 SETD7Q8WTS6 366 aaKnown RBP12.4□□□□□ -0.42
RNF4-216ENST00000511859 HSPA12BQ96MM6 686 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 ZNF560Q96MR9 790 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 CDC6Q99741 560 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 DDX43Q9NXZ2 648 aaKnown RBP12.4□□□□□ -0.42
RNF4-216ENST00000511859 EHD2Q9NZN4 543 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 TRPM5Q9NZQ8 1165 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 CALCOCO1Q9P1Z2 691 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 TBC1D14Q9P2M4 693 aa12.4□□□□□ -0.42
RNF4-216ENST00000511859 COL6A6A6NMZ7 2263 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 E9PAM4 449 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 LAD1O00515 517 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 JAK2O60674 1132 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 HUS1O60921 280 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 NDUFS2O75306 463 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 ADH5P11766 374 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 PLA2G2AP14555 144 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 HOXB2P14652 356 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 ABCD1P33897 745 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 MAGEA11P43364 429 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 ABCG1P45844 678 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 ACOT2P49753 483 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 GAD2Q05329 585 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 C8orf34Q49A92 452 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 SLFN12LQ6IEE8 588 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 DBX2Q6ZNG2 339 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 C12orf40Q86WS4 652 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 SCN4BQ8IWT1 228 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 PDCL2Q8N4E4 241 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 SPATA17Q96L03 361 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 PKMYT1Q99640 499 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 RNF38Q9H0F5 515 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 ZDHHC4Q9NPG8 344 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 NOL7Q9UMY1 257 aaKnown RBP12.39□□□□□ -0.43
RNF4-216ENST00000511859 STARD13Q9Y3M8 1113 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 NFE2L3Q9Y4A8 694 aa12.39□□□□□ -0.43
RNF4-216ENST00000511859 A0A1B0GTW7 788 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 C1QL1O75973 258 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 NTSR1P30989 418 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 LHX1P48742 406 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 SLC12A3P55017 1021 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 GUCY1B3Q02153 619 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 GRIK2Q13002 908 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 CAMK2BQ13554 666 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 SDE2Q6IQ49 451 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 IL27RAQ6UWB1 636 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 VSTM1Q6UX27 236 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 DTHD1Q6ZMT9 781 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 C4orf50Q6ZRC1 276 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 DDX42Q86XP3 938 aaKnown RBP eCLIP12.38□□□□□ -0.43
RNF4-216ENST00000511859 PHTF2Q8N3S3 785 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 SPRYD3Q8NCJ5 442 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 OTUB2Q96DC9 234 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 CRELD1Q96HD1 420 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 MMTAG2Q9BU76 263 aaKnown RBP12.38□□□□□ -0.43
RNF4-216ENST00000511859 DEC1Q9P2X7 70 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 ODF2LQ9ULJ1 636 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 RAI2Q9Y5P3 530 aa12.38□□□□□ -0.43
RNF4-216ENST00000511859 A0A1W2PQF6 199 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 ZNF840PA6NDX5 716 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 CAPN8A6NHC0 703 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 PP2D1A8MPX8 630 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 CER1O95813 267 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 OLFM2O95897 454 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 PCSK1P29120 753 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 PRPHP41219 470 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 KDSRQ06136 332 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 HYIQ5T013 277 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 BTBD8Q5XKL5 378 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 ADALQ6DHV7 355 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 FAM171BQ6P995 826 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 DENND5BQ6ZUT9 1274 aa12.37□□□□□ -0.43
RNF4-216ENST00000511859 BAHD1Q8TBE0 780 aaPredicted RBP12.37□□□□□ -0.43
RNF4-216ENST00000511859 DNASE2BQ8WZ79 361 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms