RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 RHOBTB3O94955 611 aa5.99□□□□□ -1.45
USP38-203ENST00000511739 C4BPBP20851 252 aa5.99□□□□□ -1.45
USP38-203ENST00000511739 FNTAP49354 379 aa5.99□□□□□ -1.45
USP38-203ENST00000511739 FNDC3BQ53EP0 1204 aaKnown RBP5.99□□□□□ -1.45
USP38-203ENST00000511739 TIGD7Q6NT04 549 aaPredicted RBP5.99□□□□□ -1.45
USP38-203ENST00000511739 COLGALT2Q8IYK4 626 aa5.99□□□□□ -1.45
USP38-203ENST00000511739 FAM151AQ8WW52 585 aa5.99□□□□□ -1.45
USP38-203ENST00000511739 OSBPL5Q9H0X9 879 aaPredicted RBP5.99□□□□□ -1.45
USP38-203ENST00000511739 RRAGCQ9HB90 399 aa5.99□□□□□ -1.45
USP38-203ENST00000511739 PALMDQ9NP74 551 aa5.99□□□□□ -1.45
USP38-203ENST00000511739 MIEF1Q9NQG6 463 aa5.99□□□□□ -1.45
USP38-203ENST00000511739 RGS18Q9NS28 235 aa5.99□□□□□ -1.45
USP38-203ENST00000511739 KLF15Q9UIH9 416 aa5.99□□□□□ -1.45
USP38-203ENST00000511739 MCM8Q9UJA3 840 aa5.99□□□□□ -1.45
USP38-203ENST00000511739 DSEQ9UL01 958 aa5.99□□□□□ -1.45
USP38-203ENST00000511739 SPATA31A5Q5VU36 1347 aa5.99□□□□□ -1.45
USP38-203ENST00000511739 SPATA31A7Q8IWB4 1347 aa5.99□□□□□ -1.45
USP38-203ENST00000511739 FAM187AA6NFU0 413 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 LGALS16A8MUM7 142 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 SNAP23O00161 211 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 TIPRLO75663 272 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 GPD1P21695 349 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 NOS3P29474 1203 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 LSP1P33241 339 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 FEN1P39748 380 aaKnown RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 GEMP55040 296 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 DYNC1I2Q13409 638 aaKnown RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 SLC25A24Q6NUK1 477 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 RFX8Q6ZV50 586 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 RPAINQ86UA6 219 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 VSTM4Q8IW00 320 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 B3GALNT2Q8NCR0 500 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 ST13P5Q8NFI4 369 aaPredicted RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 ATL2Q8NHH9 583 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 NEDD1Q8NHV4 660 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 CPA5Q8WXQ8 436 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 MYCBPQ99417 103 aaPredicted RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 PRRG3Q9BZD7 231 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 ZCCHC2Q9C0B9 1178 aaKnown RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 KLHL25Q9H0H3 589 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 VCPKMTQ9H867 229 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 RMND5AQ9H871 391 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 HMX1Q9NP08 348 aaPredicted RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 ADARB2Q9NS39 739 aaKnown RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 RNF112Q9ULX5 631 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 XRN1Q8IZH2 1706 aaKnown RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 MTA2O94776 668 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 MSH3P20585 1137 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 PPP2R1BP30154 601 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 ALDH9A1P49189 494 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 GEMIN4P57678 1058 aaKnown RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 EFEMP1Q12805 493 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 STX3Q13277 289 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 GLRA4Q5JXX5 417 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 ATAD3BQ5T9A4 648 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 CYP4X1Q8N118 509 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 TBC1D16Q8TBP0 767 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 RFFLQ8WZ73 363 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 MTERF3Q96E29 417 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 FAM84BQ96KN1 310 aaPredicted RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 AGXT2Q9BYV1 514 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 IL1RL2Q9HB29 575 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 AHSPQ9NZD4 102 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 KANSL3Q9P2N6 904 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 XPO7Q9UIA9 1087 aaKnown RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 M0QYT0 321 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 ATP8B1O43520 1251 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 MFAP3LO75121 409 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 TCF7P36402 384 aaPredicted RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 GPR1P46091 355 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 CCR4P51679 360 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 FAM83EQ2M2I3 478 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 NEK10Q6ZWH5 1172 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 OTOAQ7RTW8 1153 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 MICU2Q8IYU8 434 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 MARCH10Q8NA82 808 aaPredicted RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 IGDCC4Q8TDY8 1250 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 CYFIP2Q96F07 1278 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 SMARCAL1Q9NZC9 954 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 PAK5Q9P286 719 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 SNX6Q9UNH7 406 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 TDRKHQ9Y2W6 561 aaKnown RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 NFAT5O94916 1531 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 NALCNQ8IZF0 1738 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 E2F8A0AVK6 867 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 SLC26A4O43511 780 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 NTSR2O95665 410 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 NDUFB10O96000 172 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 FLT3P36888 993 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 DEFA1P59665 94 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 DEFA3P59666 94 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 MAGOHP61326 146 aaKnown RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 CYP51A1Q16850 503 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 C11orf88Q6PI97 169 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 KIAA1324Q6UXG2 1013 aaKnown RBP5.98□□□□□ -1.45
USP38-203ENST00000511739 DENND6AQ8IWF6 608 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 DTX3LQ8TDB6 740 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 SUSD6Q92537 303 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 GMCL1Q96IK5 515 aa5.98□□□□□ -1.45
USP38-203ENST00000511739 OMDQ99983 421 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms