RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CHRNA3P32297 505 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 TAS2R40P59535 323 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 MRPS5P82675 430 aaKnown RBP15.95■□□□□ 0.14
SCLT1-209ENST00000511426 SLC25A11Q02978 314 aaKnown RBP15.95■□□□□ 0.14
SCLT1-209ENST00000511426 VSTM1Q6UX27 236 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 SCUBE3Q8IX30 993 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 C12orf50Q8NA57 414 aaPredicted RBP15.95■□□□□ 0.14
SCLT1-209ENST00000511426 HNRNPLLQ8WVV9 542 aaKnown RBP15.95■□□□□ 0.14
SCLT1-209ENST00000511426 RXFP2Q8WXD0 754 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.95■□□□□ 0.14
SCLT1-209ENST00000511426 PARD6BQ9BYG5 372 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 ZCWPW1Q9H0M4 648 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 RRN3Q9NYV6 651 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 EHD2Q9NZN4 543 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 STK39Q9UEW8 545 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 USTQ9Y2C2 406 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 PRG3Q9Y2Y8 225 aaPredicted RBP15.95■□□□□ 0.14
SCLT1-209ENST00000511426 I3L4J1 428 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 DAB1O75553 588 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 TNFRSF8P28908 595 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 SSR1P43307 286 aaKnown RBP15.95■□□□□ 0.14
SCLT1-209ENST00000511426 SLC11A1P49279 550 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 FNTAP49354 379 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 ZNF211Q13398 564 aaPredicted RBP15.95■□□□□ 0.14
SCLT1-209ENST00000511426 DHX34Q14147 1143 aaKnown RBP15.95■□□□□ 0.14
SCLT1-209ENST00000511426 SMC1AQ14683 1233 aaKnown RBP15.95■□□□□ 0.14
SCLT1-209ENST00000511426 MAP9Q49MG5 647 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 FUT10Q6P4F1 479 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 ANKS3Q6ZW76 656 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 BEND5Q7L4P6 421 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 STRADAQ7RTN6 431 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 UBE2Q1Q7Z7E8 422 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 OR10T2Q8NGX3 314 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 TEKT4Q8WW24 435 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 MARCH5Q9NX47 278 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 STIM2Q9P246 746 aa15.95■□□□□ 0.14
SCLT1-209ENST00000511426 ZNF487B1APH4 448 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 CLDN5O00501 218 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 PHF2O75151 1096 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 GABBR2O75899 941 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 RHOXF2BP0C7M4 288 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 FLT3P36888 993 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 ALDH7A1P49419 539 aaKnown RBP15.94■□□□□ 0.14
SCLT1-209ENST00000511426 MAP3K7CLP57077 242 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 ADCY1Q08828 1119 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 ADIGQ0VDE8 80 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 BOLA3Q53S33 107 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 VARS2Q5ST30 1063 aaKnown RBP15.94■□□□□ 0.14
SCLT1-209ENST00000511426 SPATA2LQ8IUW3 424 aaPredicted RBP15.94■□□□□ 0.14
SCLT1-209ENST00000511426 CMTR2Q8IYT2 770 aaKnown RBP15.94■□□□□ 0.14
SCLT1-209ENST00000511426 EMC1Q8N766 993 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 C2orf15Q8WU43 125 aaKnown RBP15.94■□□□□ 0.14
SCLT1-209ENST00000511426 TSC1Q92574 1164 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 CENPIQ92674 756 aaPredicted RBP15.94■□□□□ 0.14
SCLT1-209ENST00000511426 KHSRPQ92945 711 aaKnown RBP eCLIP15.94■□□□□ 0.141e-6■■□□□ 13
SCLT1-209ENST00000511426 VWCEQ96DN2 955 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 SMOQ99835 787 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 LPIN3Q9BQK8 851 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 RHOXF2Q9BQY4 288 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 C11orf84Q9BUA3 381 aaPredicted RBP15.94■□□□□ 0.14
SCLT1-209ENST00000511426 DDX23Q9BUQ8 820 aaKnown RBP15.94■□□□□ 0.14
SCLT1-209ENST00000511426 SMARCAL1Q9NZC9 954 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 FEZ2Q9UHY8 353 aaPredicted RBP15.94■□□□□ 0.14
SCLT1-209ENST00000511426 STAP1Q9ULZ2 295 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 USP18Q9UMW8 372 aa15.94■□□□□ 0.14
SCLT1-209ENST00000511426 TJP3O95049 919 aa15.93■□□□□ 0.14
SCLT1-209ENST00000511426 LCP1P13796 627 aa15.93■□□□□ 0.14
SCLT1-209ENST00000511426 NOS2P35228 1153 aa15.93■□□□□ 0.14
SCLT1-209ENST00000511426 MATKP42679 507 aa15.93■□□□□ 0.14
SCLT1-209ENST00000511426 MAGEA11P43364 429 aa15.93■□□□□ 0.14
SCLT1-209ENST00000511426 YWHAZP63104 245 aaKnown RBP15.93■□□□□ 0.14
SCLT1-209ENST00000511426 TFDP3Q5H9I0 405 aa15.93■□□□□ 0.14
SCLT1-209ENST00000511426 CPNE8Q86YQ8 564 aa15.93■□□□□ 0.14
SCLT1-209ENST00000511426 PSTKQ8IV42 348 aaKnown RBP15.93■□□□□ 0.14
SCLT1-209ENST00000511426 CMASQ8NFW8 434 aaPredicted RBP15.93■□□□□ 0.14
SCLT1-209ENST00000511426 ZNF689Q96CS4 500 aaPredicted RBP15.93■□□□□ 0.14
SCLT1-209ENST00000511426 CEP295NLQ96MC4 621 aa15.93■□□□□ 0.14
SCLT1-209ENST00000511426 KRT12Q99456 494 aa15.93■□□□□ 0.14
SCLT1-209ENST00000511426 FRMD8P1Q9BZ68 369 aaPredicted RBP15.93■□□□□ 0.14
SCLT1-209ENST00000511426 OSBPL8Q9BZF1 889 aa15.93■□□□□ 0.14
SCLT1-209ENST00000511426 LRRC19Q9H756 370 aa15.93■□□□□ 0.14
SCLT1-209ENST00000511426 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.93■□□□□ 0.141e-6■■■■□ 24
SCLT1-209ENST00000511426 SCN5AQ14524 2016 aa15.93■□□□□ 0.14
SCLT1-209ENST00000511426 TRIM43BA6NCK2 446 aa15.92■□□□□ 0.14
SCLT1-209ENST00000511426 FAM187AA6NFU0 413 aa15.92■□□□□ 0.14
SCLT1-209ENST00000511426 HHLA1C9JL84 531 aa15.92■□□□□ 0.14
SCLT1-209ENST00000511426 TRIM66O15016 1216 aa15.92■□□□□ 0.14
SCLT1-209ENST00000511426 MDM4O15151 490 aa15.92■□□□□ 0.14
SCLT1-209ENST00000511426 PRPSAP2O60256 369 aa15.92■□□□□ 0.14
SCLT1-209ENST00000511426 KRT1P04264 644 aa15.92■□□□□ 0.14
SCLT1-209ENST00000511426 TKTL1P51854 596 aa15.92■□□□□ 0.14
SCLT1-209ENST00000511426 BCAR1P56945 870 aa15.92■□□□□ 0.14
SCLT1-209ENST00000511426 DAOAP59103 153 aa15.92■□□□□ 0.14
SCLT1-209ENST00000511426 RNASE9P60153 205 aaKnown RBP15.92■□□□□ 0.14
SCLT1-209ENST00000511426 KLF1Q13351 362 aaPredicted RBP15.92■□□□□ 0.14
SCLT1-209ENST00000511426 PPIGQ13427 754 aaKnown RBP eCLIP15.92■□□□□ 0.14
SCLT1-209ENST00000511426 SLC25A52Q3SY17 297 aa15.92■□□□□ 0.14
SCLT1-209ENST00000511426 CCDC14Q49A88 953 aa15.92■□□□□ 0.14
SCLT1-209ENST00000511426 FAM171A1Q5VUB5 890 aa15.92■□□□□ 0.14
SCLT1-209ENST00000511426 PM20D1Q6GTS8 502 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms