RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 ENDOD1O94919 500 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 ATG7O95352 703 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 NR3C2P08235 984 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 PDHA1P08559 390 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 SUPT20HL2P0C7V6 817 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 MYL2P10916 166 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 PIM1P11309 404 aaPredicted RBP9.49□□□□□ -0.89
SNF8-210ENST00000511214 GNAT1P11488 350 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 PRKCHP24723 683 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 CDC25CP30307 473 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 PEX19P40855 299 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 ACOT2P49753 483 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 SERPINB9P50453 376 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 EIF3EP60228 445 aaKnown RBP9.49□□□□□ -0.89
SNF8-210ENST00000511214 TGFB2P61812 414 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 AP2B1P63010 937 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 WASHC5Q12768 1159 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 TFDP2Q14188 446 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 KCNJ11Q14654 390 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 EFTUD2Q15029 972 aaKnown RBP eCLIP9.49□□□□□ -0.891e-7■□□□□ 10.6
SNF8-210ENST00000511214 NOMO1Q15155 1222 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 SUPT20HL1Q3ZLR7 823 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 GPAT2Q6NUI2 795 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 SWSAP1Q6NVH7 229 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 RINLQ6ZS11 566 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 ARCQ7LC44 396 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 MYLK4Q86YV6 388 aaPredicted RBP9.49□□□□□ -0.89
SNF8-210ENST00000511214 SEPT12Q8IYM1 358 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 SCYL3Q8IZE3 742 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 SLC4A11Q8NBS3 891 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.49□□□□□ -0.893e-6■■■■■ 38.3
SNF8-210ENST00000511214 NSUN6Q8TEA1 469 aaKnown RBP9.49□□□□□ -0.89
SNF8-210ENST00000511214 NRG4Q8WWG1 115 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 PTPRN2Q92932 1015 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 RTP4Q96DX8 246 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 DTNBP1Q96EV8 351 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 NIFKQ9BYG3 293 aaKnown RBP9.49□□□□□ -0.89
SNF8-210ENST00000511214 ZNF341Q9BYN7 854 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 IQCGQ9H095 443 aaKnown RBP9.49□□□□□ -0.89
SNF8-210ENST00000511214 VPS33BQ9H267 617 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 VCX3BQ9H321 246 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 FAM124BQ9H5Z6 455 aaPredicted RBP9.49□□□□□ -0.89
SNF8-210ENST00000511214 DHX33Q9H6R0 707 aaKnown RBP9.49□□□□□ -0.89
SNF8-210ENST00000511214 JPH1Q9HDC5 661 aaPredicted RBP9.49□□□□□ -0.89
SNF8-210ENST00000511214 ARHGEF4Q9NR80 690 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 ZDHHC7Q9NXF8 308 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 DLGAP2Q9P1A6 1054 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 SIRPGQ9P1W8 387 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 PAK5Q9P286 719 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 SEPT9Q9UHD8 586 aaPredicted RBP9.49□□□□□ -0.89
SNF8-210ENST00000511214 NUMBLQ9Y6R0 609 aa9.49□□□□□ -0.89
SNF8-210ENST00000511214 SPDYE5A6NIY4 337 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 ENO4A6NNW6 628 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 YDJCA8MPS7 323 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 SPATA31C2B4DYI2 1134 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 GOLGA8SH3BPF8 625 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 GOLGA8MH3BSY2 632 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 LRCH4O75427 683 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 KRT38O76015 456 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 SERPINA6P08185 405 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 MMP10P09238 476 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 KRT3P12035 628 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 BGNP21810 368 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 KCNA3P22001 575 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 CNTFP26441 200 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 CRABP2P29373 138 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 ELK3P41970 407 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 EFNA5P52803 228 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 CACNA2D1P54289 1103 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 GDF10P55107 478 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 WNT7BP56706 349 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 ACTR3P61158 418 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 ACTR2P61160 394 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 ROR1Q01973 937 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 FAAP100Q0VG06 881 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 OVGP1Q12889 678 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 HNRNPDQ14103 355 aaKnown RBP9.48□□□□□ -0.89
SNF8-210ENST00000511214 DUOXA2Q1HG44 320 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 GNPTABQ3T906 1256 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 TBC1D10BQ4KMP7 808 aaPredicted RBP9.48□□□□□ -0.89
SNF8-210ENST00000511214 HP1BP3Q5SSJ5 553 aaPredicted RBP9.48□□□□□ -0.89
SNF8-210ENST00000511214 LMBRD2Q68DH5 695 aaPredicted RBP9.48□□□□□ -0.89
SNF8-210ENST00000511214 TXNRD3NBQ6F5E7 133 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 TIFABQ6ZNK6 161 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 CAPN12Q6ZSI9 719 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 CYS1Q717R9 158 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 CCDC60Q8IWA6 550 aaPredicted RBP9.48□□□□□ -0.89
SNF8-210ENST00000511214 SCUBE1Q8IWY4 988 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 CDAN1Q8IWY9 1227 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 WDTC1Q8N5D0 677 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 MCUQ8NE86 351 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 OR5B17Q8NGF7 314 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 PIP4K2CQ8TBX8 421 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 USP6NLQ92738 828 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 PPP2R3CQ969Q6 453 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 TTC17Q96AE7 1141 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 E2F7Q96AV8 911 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 ELMO3Q96BJ8 720 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 HAUS1Q96CS2 278 aa9.48□□□□□ -0.89
SNF8-210ENST00000511214 SERAC1Q96JX3 654 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms