RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 SLC32A1Q9H598 525 aa11.11□□□□□ -0.63
DDX41-211ENST00000510171 CRTAC1Q9NQ79 661 aa11.11□□□□□ -0.63
DDX41-211ENST00000510171 PANK4Q9NVE7 773 aa11.11□□□□□ -0.63
DDX41-211ENST00000510171 SMPD4Q9NXE4 827 aa11.11□□□□□ -0.63
DDX41-211ENST00000510171 BCCIPQ9P287 314 aaKnown RBP eCLIP11.11□□□□□ -0.63
DDX41-211ENST00000510171 FBXO2Q9UK22 296 aaPredicted RBP11.11□□□□□ -0.63
DDX41-211ENST00000510171 SRPRBQ9Y5M8 271 aaKnown RBP11.11□□□□□ -0.63
DDX41-211ENST00000510171 CHD8Q9HCK8 2581 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 FRMD3A2A2Y4 597 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.1□□□□□ -0.63
DDX41-211ENST00000510171 F8VP50 259 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 SCAMP3O14828 347 aaKnown RBP11.1□□□□□ -0.63
DDX41-211ENST00000510171 OLFM2O95897 454 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 ADH1CP00326 375 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 FAM163BP0C2L3 166 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 ENGP17813 658 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 DPP6P42658 865 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 TNFRSF4P43489 277 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 KIR2DL1P43626 348 aaPredicted RBP11.1□□□□□ -0.63
DDX41-211ENST00000510171 MAPK8P45983 427 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 TAF10Q12962 218 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 RESTQ13127 1097 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 MDH1BQ5I0G3 518 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 SPDYCQ5MJ68 293 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 ARMCX6Q7L4S7 300 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 DDX42Q86XP3 938 aaKnown RBP eCLIP11.1□□□□□ -0.63
DDX41-211ENST00000510171 SFTPA1Q8IWL2 248 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 CLIC6Q96NY7 704 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 SLITRK1Q96PX8 696 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 FGFBP2Q9BYJ0 223 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 PANK2Q9BZ23 570 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 KIAA1586Q9HCI6 787 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 ARHGEF4Q9NR80 690 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 TMEM74BQ9NUR3 256 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 CFAP97Q9P2B7 532 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 TBC1D14Q9P2M4 693 aa11.1□□□□□ -0.63
DDX41-211ENST00000510171 PTPRJQ12913 1337 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 ZFHX4Q86UP3 3567 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 CNOT1A5YKK6 2376 aaKnown RBP11.09□□□□□ -0.63
DDX41-211ENST00000510171 TBC1D3BA6NDS4 549 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 OAS1P00973 400 aaKnown RBP11.09□□□□□ -0.63
DDX41-211ENST00000510171 MBL2P11226 248 aaPredicted RBP11.09□□□□□ -0.63
DDX41-211ENST00000510171 ADH5P11766 374 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 STAT6P42226 847 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 PTGER3P43115 390 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 ATXN3P54252 364 aaPredicted RBP11.09□□□□□ -0.63
DDX41-211ENST00000510171 MESP2Q0VG99 397 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 MAP7D1Q3KQU3 841 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 PREPLQ4J6C6 727 aaPredicted RBP11.09□□□□□ -0.63
DDX41-211ENST00000510171 LYSMD4Q5XG99 296 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 BTBD8Q5XKL5 378 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 STXBP4Q6ZWJ1 553 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 TRAPPC11Q7Z392 1133 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 C12orf40Q86WS4 652 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 CBWD2Q8IUF1 395 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 WDR49Q8IV35 697 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 CCDC65Q8IXS2 484 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 FRMD1Q8N878 549 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 OR6B3Q8NGW1 331 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 KCNV2Q8TDN2 545 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 HMGB4Q8WW32 186 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 GATA6Q92908 595 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 MRPL45Q9BRJ2 306 aaKnown RBP11.09□□□□□ -0.63
DDX41-211ENST00000510171 BACH2Q9BYV9 841 aa11.09□□□□□ -0.63
DDX41-211ENST00000510171 MBD1Q9UIS9 605 aaPredicted RBP11.09□□□□□ -0.63
DDX41-211ENST00000510171 MYH11P35749 1972 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 SCN1AP35498 2009 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 GREB1Q4ZG55 1949 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 TCRBV21S2A2A0A5A6 115 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 E2F8A0AVK6 867 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 SRRM3A6NNA2 597 aaPredicted RBP11.08□□□□□ -0.64
DDX41-211ENST00000510171 ADAM23O75077 832 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 TACC1O75410 805 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 CST3P01034 146 aaPredicted RBP11.08□□□□□ -0.64
DDX41-211ENST00000510171 CFIP05156 583 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 CHRM1P11229 460 aaPredicted RBP11.08□□□□□ -0.64
DDX41-211ENST00000510171 PTPN1P18031 435 aaKnown RBP11.08□□□□□ -0.64
DDX41-211ENST00000510171 SYT1P21579 422 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 YWHAQP27348 245 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 RDXP35241 583 aaKnown RBP11.08□□□□□ -0.64
DDX41-211ENST00000510171 HOXD12P35452 270 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 GAD2Q05329 585 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 KDSRQ06136 332 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 DUOXA1Q1HG43 343 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 LY6G5CQ5SRR4 150 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 KIAA1211LQ6NV74 962 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 SLC23A3Q6PIS1 610 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 SLC36A4Q6YBV0 504 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 NUDT18Q6ZVK8 323 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 NUP93Q8N1F7 819 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 HDDC3Q8N4P3 179 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 RDH13Q8NBN7 331 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 PDZD8Q8NEN9 1154 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 CEP76Q8TAP6 659 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 OTUB2Q96DC9 234 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 ELOVL4Q9GZR5 314 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 HSPBP1Q9NZL4 362 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 CHORDC1Q9UHD1 332 aaPredicted RBP11.08□□□□□ -0.64
DDX41-211ENST00000510171 PILRBQ9UKJ0 227 aa11.08□□□□□ -0.64
DDX41-211ENST00000510171 SLC6A14Q9UN76 642 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms