RNA–Protein interactions for RNA: ENST00000509990.5

MATR3-237, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MATR3, Length 3,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-237ENST00000509990 CCT8L1PA6NM43 557 aa12.9□□□□□ -0.34
MATR3-237ENST00000509990 I3L4J1 428 aa12.9□□□□□ -0.34
MATR3-237ENST00000509990 KCNN4O15554 427 aa12.9□□□□□ -0.34
MATR3-237ENST00000509990 APRTP07741 180 aa12.9□□□□□ -0.34
MATR3-237ENST00000509990 CTSHP09668 335 aa12.9□□□□□ -0.34
MATR3-237ENST00000509990 IFRD2Q12894 506 aaPredicted RBP12.9□□□□□ -0.34
MATR3-237ENST00000509990 OASLQ15646 514 aaKnown RBP12.9□□□□□ -0.34
MATR3-237ENST00000509990 PPP1R15BQ5SWA1 713 aa12.9□□□□□ -0.34
MATR3-237ENST00000509990 CDCA2Q69YH5 1023 aaPredicted RBP12.9□□□□□ -0.34
MATR3-237ENST00000509990 MAMDC4Q6UXC1 1216 aa12.9□□□□□ -0.34
MATR3-237ENST00000509990 FAM131BQ86XD5 332 aa12.9□□□□□ -0.34
MATR3-237ENST00000509990 FITM2Q8N6M3 262 aa12.9□□□□□ -0.34
MATR3-237ENST00000509990 TACO1Q9BSH4 297 aaKnown RBP12.9□□□□□ -0.34
MATR3-237ENST00000509990 RAB6BQ9NRW1 208 aa12.9□□□□□ -0.34
MATR3-237ENST00000509990 IGKV6-21A0A0C4DH24 114 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 RNF8O76064 485 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 RPSAP08865 295 aaKnown RBP12.89□□□□□ -0.35
MATR3-237ENST00000509990 RBL1P28749 1068 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 CETN2P41208 172 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 ELK3P41970 407 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 ABCG1P45844 678 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 KRT81Q14533 505 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 GRIK4Q16099 956 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 HIF1AQ16665 826 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 RFX8Q6ZV50 586 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 TAOK1Q7L7X3 1001 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 PALM2Q8IXS6 379 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 AGGF1Q8N302 714 aaeCLIP12.89□□□□□ -0.351e-9■□□□□ 10.7
MATR3-237ENST00000509990 NPLOC4Q8TAT6 608 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 RUNDC3BQ96NL0 473 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 ACAP3Q96P50 834 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 C16orf70Q9BSU1 422 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 TRIM6Q9C030 488 aaPredicted RBP12.89□□□□□ -0.35
MATR3-237ENST00000509990 ETNK2Q9NVF9 386 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 DNAJC25-GNG10A0A024R161 153 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 TSPAN1O60635 241 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 CILPO75339 1184 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 SKAP2O75563 359 aaPredicted RBP12.89□□□□□ -0.35
MATR3-237ENST00000509990 NEFHP12036 1026 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 NDUFV1P49821 464 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 YWHAEP62258 255 aaKnown RBP12.89□□□□□ -0.35
MATR3-237ENST00000509990 GBE1Q04446 702 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 MARCH8Q5T0T0 291 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 RNASEH2BQ5TBB1 312 aaKnown RBP12.89□□□□□ -0.35
MATR3-237ENST00000509990 TRIM72Q6ZMU5 477 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.89□□□□□ -0.35
MATR3-237ENST00000509990 HASPINQ8TF76 798 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 FAM172AQ8WUF8 416 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 N4BP2L2Q92802 583 aaPredicted RBP12.89□□□□□ -0.35
MATR3-237ENST00000509990 RBM41Q96IZ5 413 aaKnown RBP12.89□□□□□ -0.35
MATR3-237ENST00000509990 MECRQ9BV79 373 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 DHX35Q9H5Z1 703 aaKnown RBP12.89□□□□□ -0.35
MATR3-237ENST00000509990 HOMER3Q9NSC5 361 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 NKIRAS1Q9NYS0 192 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 SEPT10Q9P0V9 454 aa12.89□□□□□ -0.35
MATR3-237ENST00000509990 SPTLC1O15269 473 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 SNX3O60493 162 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 CYP2B6P20813 491 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 EMC10Q5UCC4 262 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 MTHFD1LQ6UB35 978 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 TRPM8Q7Z2W7 1104 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 PRR11Q96HE9 360 aaPredicted RBP12.88□□□□□ -0.35
MATR3-237ENST00000509990 PITPNM3Q9BZ71 974 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 SLC13A1Q9BZW2 595 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 CNOT10Q9H9A5 744 aaKnown RBP12.88□□□□□ -0.35
MATR3-237ENST00000509990 KLC4Q9NSK0 619 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 CNTN6Q9UQ52 1028 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 MAD1L1Q9Y6D9 718 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 NUMBLQ9Y6R0 609 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 ATP8B3O60423 1300 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 SIGLEC16A6NMB1 481 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 PFKMP08237 780 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 RARBP10826 455 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 OSBPP22059 807 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 PROZP22891 400 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 SPARCL1Q14515 664 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 MDH1BQ5I0G3 518 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 PPP1R21Q6ZMI0 780 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 MPP5Q8N3R9 675 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 GPRC5AQ8NFJ5 357 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 DEPDC1BQ8WUY9 529 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 ATXN7L3BQ96GX2 97 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 FAM167AQ96KS9 214 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 RHOBTB2Q9BYZ6 727 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.88□□□□□ -0.356e-12■□□□□ 10.5
MATR3-237ENST00000509990 PIN4Q9Y237 131 aaKnown RBP12.88□□□□□ -0.35
MATR3-237ENST00000509990 A8MXQ7 604 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 EIF4BP23588 611 aaKnown RBP12.88□□□□□ -0.35
MATR3-237ENST00000509990 PIGHQ14442 188 aaPredicted RBP12.88□□□□□ -0.35
MATR3-237ENST00000509990 PPP2R5DQ14738 602 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 FAM228AQ86W67 206 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 ZCCHC9Q8N567 271 aaKnown RBP12.88□□□□□ -0.35
MATR3-237ENST00000509990 OR6J1Q8NGC5 347 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 BRI3BPQ8WY22 251 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 DONSONQ9NYP3 566 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 MARCOQ9UEW3 520 aaPredicted RBP12.88□□□□□ -0.35
MATR3-237ENST00000509990 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.88□□□□□ -0.35
MATR3-237ENST00000509990 TNFSF13BQ9Y275 285 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 SNX10Q9Y5X0 201 aa12.88□□□□□ -0.35
MATR3-237ENST00000509990 PARP14Q460N5 1801 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms