RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 GABBR2O75899 941 aa14.36□□□□□ -0.11
SNF8-206ENST00000509989 FGF19O95750 216 aa14.36□□□□□ -0.11
SNF8-206ENST00000509989 GNA14O95837 355 aa14.36□□□□□ -0.11
SNF8-206ENST00000509989 ABL1P00519 1130 aa14.36□□□□□ -0.11
SNF8-206ENST00000509989 DCNP07585 359 aaKnown RBP14.36□□□□□ -0.11
SNF8-206ENST00000509989 ERCC5P28715 1186 aaPredicted RBP14.36□□□□□ -0.11
SNF8-206ENST00000509989 MTIF2P46199 727 aaKnown RBP14.36□□□□□ -0.11
SNF8-206ENST00000509989 FCHO2Q0JRZ9 810 aa14.36□□□□□ -0.11
SNF8-206ENST00000509989 MLF2Q15773 248 aaPredicted RBP14.36□□□□□ -0.11
SNF8-206ENST00000509989 TMEM270Q6UE05 265 aa14.36□□□□□ -0.11
SNF8-206ENST00000509989 UBA3Q8TBC4 463 aa14.36□□□□□ -0.11
SNF8-206ENST00000509989 FBXO32Q969P5 355 aa14.36□□□□□ -0.11
SNF8-206ENST00000509989 GCNAQ96QF7 691 aa14.36□□□□□ -0.11
SNF8-206ENST00000509989 MFSD1Q9H3U5 465 aa14.36□□□□□ -0.11
SNF8-206ENST00000509989 THAP9Q9H5L6 903 aa14.36□□□□□ -0.11
SNF8-206ENST00000509989 CCSER2Q9H7U1 834 aa14.36□□□□□ -0.11
SNF8-206ENST00000509989 GTSE1Q9NYZ3 720 aa14.36□□□□□ -0.11
SNF8-206ENST00000509989 GOLGA6L22H0YM25 854 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 CYP26A1O43174 497 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 FAM200BP0CF97 657 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 PNMA6AP0CW24 399 aaPredicted RBP14.35□□□□□ -0.11
SNF8-206ENST00000509989 ARSAP15289 507 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 BRD2P25440 801 aaKnown RBP14.35□□□□□ -0.11
SNF8-206ENST00000509989 YWHAQP27348 245 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 WEE1P30291 646 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 KCNMA1Q12791 1236 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 FZD5Q13467 585 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 GOLGA7BQ2TAP0 167 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 ASTLQ6HA08 431 aaPredicted RBP14.35□□□□□ -0.11
SNF8-206ENST00000509989 TXNDC11Q6PKC3 985 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 TPRG1Q6ZUI0 275 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 BPIFB1Q8TDL5 484 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 DDX23Q9BUQ8 820 aaKnown RBP14.35□□□□□ -0.11
SNF8-206ENST00000509989 DUSP16Q9BY84 665 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 HSD3B7Q9H2F3 369 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 LINC00597Q9H2U6 94 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 HPS4Q9NQG7 708 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 GKN1Q9NS71 199 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 TDP1Q9NUW8 608 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 SMPD4Q9NXE4 827 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 TAB2Q9NYJ8 693 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 TRPM5Q9NZQ8 1165 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 UXTQ9UBK9 157 aaPredicted RBP14.35□□□□□ -0.11
SNF8-206ENST00000509989 NUDT5Q9UKK9 219 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 NFE2L3Q9Y4A8 694 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 PCDHB4Q9Y5E5 795 aa14.35□□□□□ -0.11
SNF8-206ENST00000509989 KIAA1549LQ6ZVL6 1849 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 FAM92AA1XBS5 289 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 ANTXRLA6NF34 631 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 BECN2A8MW95 431 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 KCNJ18B7U540 433 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 STK25O00506 426 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 ZNF263O14978 683 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 MDM4O15151 490 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 P4HA2O15460 535 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 COCHO43405 550 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 TBX18O95935 607 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 OAS1P00973 400 aaKnown RBP14.34□□□□□ -0.11
SNF8-206ENST00000509989 CKMP06732 381 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 ZDHHC11BP0C7U3 371 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 CD19P15391 556 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 HDCP19113 662 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 AOC1P19801 751 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 TARSP26639 723 aaKnown RBP14.34□□□□□ -0.11
SNF8-206ENST00000509989 PON1P27169 355 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 HOXC13P31276 330 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 AVPR1AP37288 418 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 STARD6P59095 220 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 PDE4CQ08493 712 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 KCNJ12Q14500 433 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 ZNF77Q15935 545 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 TPD52L1Q16890 204 aaPredicted RBP14.34□□□□□ -0.11
SNF8-206ENST00000509989 CCDC183Q5T5S1 534 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 ARHGAP17Q68EM7 881 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 CAVIN1Q6NZI2 390 aaKnown RBP14.34□□□□□ -0.11
SNF8-206ENST00000509989 TRIM65Q6PJ69 517 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 SCD5Q86SK9 330 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 PIGZQ86VD9 579 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 SUGP1Q8IWZ8 645 aaKnown RBP14.34□□□□□ -0.11
SNF8-206ENST00000509989 CCDC105Q8IYK2 499 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 ZNF687Q8N1G0 1237 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 CELF5Q8N6W0 485 aaKnown RBP14.34□□□□□ -0.11
SNF8-206ENST00000509989 RBBP8NLQ8NC74 664 aaPredicted RBP14.34□□□□□ -0.11
SNF8-206ENST00000509989 SH3RF2Q8TEC5 729 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 DEPDC1BQ8WUY9 529 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 FAXDC2Q96IV6 333 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 ZFRQ96KR1 1074 aaKnown RBP14.34□□□□□ -0.11
SNF8-206ENST00000509989 UBE2TQ9NPD8 197 aaPredicted RBP14.34□□□□□ -0.11
SNF8-206ENST00000509989 FANCLQ9NW38 375 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 DLGAP2Q9P1A6 1054 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 TSPAN16Q9UKR8 245 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 WNT6Q9Y6F9 365 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 ATP8B3O60423 1300 aa14.34□□□□□ -0.11
SNF8-206ENST00000509989 TRAV19A0A0A6YYK7 116 aa14.33□□□□□ -0.12
SNF8-206ENST00000509989 O00370 1275 aa14.33□□□□□ -0.12
SNF8-206ENST00000509989 PIK3R2O00459 728 aa14.33□□□□□ -0.12
SNF8-206ENST00000509989 DPYSL4O14531 572 aa14.33□□□□□ -0.12
SNF8-206ENST00000509989 CHADO15335 359 aa14.33□□□□□ -0.12
SNF8-206ENST00000509989 FGFR1OPO95684 399 aaKnown RBP14.33□□□□□ -0.12
SNF8-206ENST00000509989 OLFM2O95897 454 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms