RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 GCP02774 474 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 CHRM3P20309 590 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 ITGALP20701 1170 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 SLC7A1P30825 629 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 GCLCP48506 637 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 SLC11A2P49281 568 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 POLD3Q15054 466 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 SF3B3Q15393 1217 aaKnown RBP8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 LONRF3Q496Y0 759 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 AMOTQ4VCS5 1084 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 VWA1Q6PCB0 445 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 Q6ZNX1 250 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 CCDC149Q6ZUS6 474 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 FAM109AQ8N4B1 249 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 TCP11L2Q8N4U5 519 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 OR6B3Q8NGW1 331 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 AIFM2Q9BRQ8 373 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 GEMIN8Q9NWZ8 242 aaKnown RBP8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 TPCN1Q9ULQ1 816 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 PAXBP1Q9Y5B6 917 aa8.32□□□□□ -1.08
TRAPPC11-206ENST00000509857 ZNF142P52746 1687 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 A0A0B4J269 797 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 BTN3A1O00481 513 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 RAMP2O60895 175 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 RHOBTB3O94955 611 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 ATXN1LP0C7T5 689 aaKnown RBP8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 PROZP22891 400 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 MPLP40238 635 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 WNT3P56703 355 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 FOXI1Q12951 378 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 MPP3Q13368 585 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 TUBB3Q13509 450 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 KIAA0753Q2KHM9 967 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 KIAA0895LQ68EN5 471 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 MAML1Q92585 1016 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 TTC17Q96AE7 1141 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 TIFAQ96CG3 184 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 SLC46A1Q96NT5 459 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 MOGAT1Q96PD6 335 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 SMURF2Q9HAU4 748 aa8.31□□□□□ -1.08
TRAPPC11-206ENST00000509857 USP19O94966 1318 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 TTC21AQ8NDW8 1320 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 XRN1Q8IZH2 1706 aaKnown RBP8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 TRIAP1O43715 76 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 ZNF134P52741 427 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 UCP3P55916 312 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 TGFB2P61812 414 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 CALD1Q05682 793 aaKnown RBP8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 SEMA5AQ13591 1074 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 HLTFQ14527 1009 aaKnown RBP eCLIP8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 LMBRD2Q68DH5 695 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 SLC44A3Q8N4M1 653 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 SLC30A5Q8TAD4 765 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 LPIN2Q92539 896 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 SLC9A6Q92581 669 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 CHFRQ96EP1 664 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 APIPQ96GX9 242 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 PLEKHF1Q96S99 279 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 KRTAP4-2Q9BYR5 136 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 XPR1Q9UBH6 696 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 TMX2Q9Y320 296 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 NRKQ7Z2Y5 1582 aa8.3□□□□□ -1.08
TRAPPC11-206ENST00000509857 WDR33Q9C0J8 1336 aaKnown RBP8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 A0A087X1B8 175 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 CYP2C9P11712 490 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 PPP3CBP16298 524 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 TYRP1P17643 537 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 ADRA1BP35368 520 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 LOXL3P58215 753 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 PURAQ00577 322 aaKnown RBP8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 IQCB1Q15051 598 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 HSP90AB2PQ58FF8 381 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 CENPQQ7L2Z9 268 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 CCDC146Q8IYE0 955 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 DNAJC5GQ8N7S2 189 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 EXOC6Q8TAG9 804 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 LRRC27Q9C0I9 530 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 IKZF4Q9H2S9 585 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 STK32BQ9NY57 414 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 DMRT1Q9Y5R6 373 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 KIF24Q5T7B8 1368 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 CEP170BQ9Y4F5 1589 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 MAP2P11137 1827 aaKnown RBP8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 MAPK8IP3Q9UPT6 1336 aa8.29□□□□□ -1.08
TRAPPC11-206ENST00000509857 USP54Q70EL1 1684 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 F5H697 171 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 MYF5P13349 255 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 PEX2P28328 305 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 FOLR3P41439 243 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 TMPOP42166 694 aaKnown RBP8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 COL10A1Q03692 680 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 ITIH3Q06033 890 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 SLC13A2Q13183 592 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 RBM20Q5T481 1227 aaKnown RBP8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 MYCBPAPQ8TBZ2 947 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 FBXO41Q8TF61 875 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 CAVIN3Q969G5 261 aa8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 NMD3Q96D46 503 aaKnown RBP8.28□□□□□ -1.08
TRAPPC11-206ENST00000509857 COG3Q96JB2 828 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms