RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 C4BPAP04003 597 aaKnown RBP16.36■□□□□ 0.21
TPM3-219ENST00000509409 MBL2P11226 248 aaPredicted RBP16.36■□□□□ 0.21
TPM3-219ENST00000509409 P4HA1P13674 534 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 PFKFB1P16118 471 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 CMA1P23946 247 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 YWHAQP27348 245 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 RAP1GAPP47736 663 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 CACNA2D1P54289 1103 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 SLC7A9P82251 487 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 CSRP2Q16527 193 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 CEP135Q66GS9 1140 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 CCDC26Q8TAB7 109 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 GAB3Q8WWW8 586 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 FBXO32Q969P5 355 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 CCDC47Q96A33 483 aaKnown RBP16.36■□□□□ 0.21
TPM3-219ENST00000509409 ELMO3Q96BJ8 720 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 TNIP3Q96KP6 325 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 SPATA32Q96LK8 384 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 DMAC2Q9NW81 257 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 CHORDC1Q9UHD1 332 aaPredicted RBP16.36■□□□□ 0.21
TPM3-219ENST00000509409 USP25Q9UHP3 1055 aa16.36■□□□□ 0.21
TPM3-219ENST00000509409 CCDC163A0A0D9SF12 145 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 SLC9A3R1O14745 358 aaPredicted RBP16.35■□□□□ 0.21
TPM3-219ENST00000509409 CALUO43852 315 aaPredicted RBP16.35■□□□□ 0.21
TPM3-219ENST00000509409 SEC13P55735 322 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 ZXDBP98169 803 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 DMC1Q14565 340 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 SGSM1Q2NKQ1 1148 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 PRR23CQ6ZRP0 262 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 FILIP1Q7Z7B0 1213 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 KBTBD6Q86V97 674 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 SLC9A9Q8IVB4 645 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 KIAA0895Q8NCT3 520 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 NETO1Q8TDF5 533 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 ACDQ96AP0 544 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 ARRDC1-AS1Q9H2J1 176 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 VRTNQ9H8Y1 702 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 FRMD4BQ9Y2L6 1034 aa16.35■□□□□ 0.21
TPM3-219ENST00000509409 PDXKO00764 312 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 SCAMP3O14828 347 aaKnown RBP16.34■□□□□ 0.21
TPM3-219ENST00000509409 KIF20AO95235 890 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 NR3C1P04150 777 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 RPN1P04843 607 aaKnown RBP16.34■□□□□ 0.21
TPM3-219ENST00000509409 SYKP43405 635 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 DLG4P78352 724 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 KRT85P78386 507 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 SYT13Q7L8C5 426 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 ACOT1Q86TX2 421 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 DDX42Q86XP3 938 aaKnown RBP eCLIP16.34■□□□□ 0.21
TPM3-219ENST00000509409 ADGRG2Q8IZP9 1017 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 PDZD8Q8NEN9 1154 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 KCNK16Q96T55 309 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 KCTD10Q9H3F6 313 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 TMEM30AQ9NV96 361 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 CFAP97Q9P2B7 532 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 ZNF638Q14966 1978 aaKnown RBP16.34■□□□□ 0.21
TPM3-219ENST00000509409 CEP250Q9BV73 2442 aa16.34■□□□□ 0.21
TPM3-219ENST00000509409 DNAH14Q0VDD8 3507 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 FOXD2O60548 495 aaPredicted RBP16.33■□□□□ 0.2
TPM3-219ENST00000509409 AP1G2O75843 785 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 VNN1O95497 513 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 APBB3O95704 486 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 OAS1P00973 400 aaKnown RBP16.33■□□□□ 0.2
TPM3-219ENST00000509409 MYL1P05976 194 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 DGKEP52429 567 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 CLDN10P78369 228 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 DHCR24Q15392 516 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 CCDC6Q16204 474 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 AASDHQ4L235 1098 aaPredicted RBP16.33■□□□□ 0.2
TPM3-219ENST00000509409 C2orf27AQ580R0 203 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 HECTD3Q5T447 861 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 FAM35AQ86V20 835 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 C12orf50Q8NA57 414 aaPredicted RBP16.33■□□□□ 0.2
TPM3-219ENST00000509409 SCAMP5Q8TAC9 235 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 OVCA2Q8WZ82 227 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 EZH1Q92800 747 aaPredicted RBP16.33■□□□□ 0.2
TPM3-219ENST00000509409 LOXL4Q96JB6 756 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 SDCBP2Q9H190 292 aa16.33■□□□□ 0.2
TPM3-219ENST00000509409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.33■□□□□ 0.28e-7■■■■■ 194.6
TPM3-219ENST00000509409 SLC30A4O14863 429 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 GDF9O60383 454 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 AKAP3O75969 853 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 TRIM21P19474 475 aaKnown RBP16.32■□□□□ 0.2
TPM3-219ENST00000509409 OPRD1P41143 372 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 SLC5A3P53794 718 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 ORC1Q13415 861 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 PAQR9Q6ZVX9 377 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 SV2AQ7L0J3 742 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 TTC30AQ86WT1 665 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 KIAA1958Q8N8K9 716 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 TSTD1Q8NFU3 115 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 TMC2Q8TDI7 906 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 TAF4BQ92750 862 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 SMARCD1Q96GM5 515 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 CHAMP1Q96JM3 812 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 NACA2Q9H009 215 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 DMAP1Q9NPF5 467 aaPredicted RBP16.32■□□□□ 0.2
TPM3-219ENST00000509409 TBC1D14Q9P2M4 693 aa16.32■□□□□ 0.2
TPM3-219ENST00000509409 KIF26AQ9ULI4 1882 aaPredicted RBP16.32■□□□□ 0.2
TPM3-219ENST00000509409 SH3BP1Q9Y3L3 701 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms