RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 ERICH4A6NGS2 130 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 SGK1O00141 431 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 XPO1O14980 1071 aaKnown RBP9.67□□□□□ -0.86
HTT-205ENST00000509043 ZNF623O75123 536 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 FBXO21O94952 628 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 TCF4P15884 667 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 AKAP5P24588 427 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 IL1R2P27930 398 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 LSP1P33241 339 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 PSMC4P43686 418 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 ARSEP51690 589 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 LILRA4P59901 499 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 MAGOHP61326 146 aaKnown RBP9.67□□□□□ -0.86
HTT-205ENST00000509043 PLCB3Q01970 1234 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 PDE4CQ08493 712 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 ORC1Q13415 861 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 RASA2Q15283 850 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 NBPF20Q3BBV1 942 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 CCDC14Q49A88 953 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 DAB2IPQ5VWQ8 1189 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 TXNRD3NBQ6F5E7 133 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 PMF1Q6P1K2 205 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 PPP1R21Q6ZMI0 780 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 CENPUQ71F23 418 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 B4GALNT4Q76KP1 1039 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 STRADAQ7RTN6 431 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 MRPL10Q7Z7H8 261 aaKnown RBP9.67□□□□□ -0.86
HTT-205ENST00000509043 CCDC25Q86WR0 208 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 RFX6Q8HWS3 928 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 PPIL6Q8IXY8 311 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 SH2D3CQ8N5H7 860 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 EMC1Q8N766 993 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 OR2W6PQ8NHA6 318 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 ACTL9Q8TC94 416 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.67□□□□□ -0.86
HTT-205ENST00000509043 RSAD2Q8WXG1 361 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 KCTD13Q8WZ19 329 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 CENPIQ92674 756 aaPredicted RBP9.67□□□□□ -0.86
HTT-205ENST00000509043 FAF2Q96CS3 445 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 SENP6Q9GZR1 1112 aaPredicted RBP9.67□□□□□ -0.86
HTT-205ENST00000509043 AAASQ9NRG9 546 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 KLHL11Q9NVR0 708 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 BCCIPQ9P287 314 aaKnown RBP eCLIP9.67□□□□□ -0.86
HTT-205ENST00000509043 RCOR3Q9P2K3 495 aaPredicted RBP9.67□□□□□ -0.86
HTT-205ENST00000509043 TJP2Q9UDY2 1190 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 FETUBQ9UGM5 382 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 LGALS13Q9UHV8 139 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 GGA2Q9UJY4 613 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 HES2Q9Y543 173 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 ACTL7BQ9Y614 415 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 CDY2AQ9Y6F7 541 aa9.67□□□□□ -0.86
HTT-205ENST00000509043 PDCD11Q14690 1871 aaKnown RBP9.67□□□□□ -0.86
HTT-205ENST00000509043 ATXN2Q99700 1313 aaKnown RBP9.66□□□□□ -0.86
HTT-205ENST00000509043 A0A087WUV0 522 aaPredicted RBP9.66□□□□□ -0.86
HTT-205ENST00000509043 GABRDO14764 452 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 PPEF2O14830 753 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 PAPSS1O43252 624 aaPredicted RBP9.66□□□□□ -0.86
HTT-205ENST00000509043 CDH16O75309 829 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 THP07101 528 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 MMP13P45452 471 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 NR2C2P49116 596 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 AIF1P55008 147 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 CDH6P55285 790 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 ZNF200P98182 395 aaPredicted RBP9.66□□□□□ -0.86
HTT-205ENST00000509043 OTUD4Q01804 1114 aaKnown RBP9.66□□□□□ -0.86
HTT-205ENST00000509043 GPS1Q13098 491 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 XRCC4Q13426 336 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 KRT81Q14533 505 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 NOMO1Q15155 1222 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 PTGISQ16647 500 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 DNAJC21Q5F1R6 531 aaKnown RBP9.66□□□□□ -0.86
HTT-205ENST00000509043 GLRA4Q5JXX5 417 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 RNASEH2BQ5TBB1 312 aaKnown RBP9.66□□□□□ -0.86
HTT-205ENST00000509043 MICALCLQ6ZW33 695 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 BZW1Q7L1Q6 419 aaKnown RBP9.66□□□□□ -0.86
HTT-205ENST00000509043 TDRPQ86YL5 185 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 C12orf29Q8N999 325 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 B3GALNT2Q8NCR0 500 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 TRPV1Q8NER1 839 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 BCAS4Q8TDM0 211 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 TRIB2Q92519 343 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 P3H4Q92791 437 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 LENG1Q96BZ8 264 aaPredicted RBP9.66□□□□□ -0.86
HTT-205ENST00000509043 PGBD4Q96DM1 585 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 RTP4Q96DX8 246 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 UROC1Q96N76 676 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 RNF157Q96PX1 679 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 RBM15Q96T37 977 aaKnown RBP eCLIP9.66□□□□□ -0.86
HTT-205ENST00000509043 C11orf84Q9BUA3 381 aaPredicted RBP9.66□□□□□ -0.86
HTT-205ENST00000509043 DDX23Q9BUQ8 820 aaKnown RBP9.66□□□□□ -0.86
HTT-205ENST00000509043 APOL6Q9BWW8 343 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 DUSP16Q9BY84 665 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 SEZ6LQ9BYH1 1024 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 TSPYL2Q9H2G4 693 aaPredicted RBP9.66□□□□□ -0.86
HTT-205ENST00000509043 ADAM7Q9H2U9 754 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 XPNPEP3Q9NQH7 507 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.66□□□□□ -0.86
HTT-205ENST00000509043 FAM105AQ9NUU6 356 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 RRN3Q9NYV6 651 aa9.66□□□□□ -0.86
HTT-205ENST00000509043 PCSK1NQ9UHG2 260 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms