RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 TCHPQ9BT92 498 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 CEP41Q9BYV8 373 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 NIF3L1Q9GZT8 377 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 PLEKHA5Q9HAU0 1116 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 KMT5AQ9NQR1 393 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 KCNG1Q9UIX4 513 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 DNM3Q9UQ16 869 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 DENND4CQ5VZ89 1909 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 CACNA1GO43497 2377 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 ANK1P16157 1881 aa9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 NUP210Q8TEM1 1887 aaPredicted RBP9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 KIF26AQ9ULI4 1882 aaPredicted RBP9.36□□□□□ -0.91
COL4A3BP-206ENST00000508809 TTC26A0AVF1 554 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 CHURC1-FNTBB4DL54 471 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 E9PMD0 336 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 TM4SF5O14894 197 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 TOM1L1O75674 476 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 ADRB2P07550 413 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 GLB1P16278 677 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 GUCY2CP25092 1073 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 MCM4P33991 863 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 FNTBP49356 437 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 TOB1P50616 345 aaPredicted RBP9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 NEK4P51957 841 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 YWHAHQ04917 246 aaPredicted RBP9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 MCL1Q07820 350 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 DMWDQ09019 674 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 DUSP4Q13115 394 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 PLD1Q13393 1074 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 LRRC32Q14392 662 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 NOLC1Q14978 699 aaKnown RBP eCLIP9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 PPM1JQ5JR12 505 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 CENPPQ6IPU0 288 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 ZPBP2Q6X784 338 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 PRR23CQ6ZRP0 262 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 PRR23BQ6ZRT6 265 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 GAREM2Q75VX8 874 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 RALGPS2Q86X27 583 aaPredicted RBP9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 ARID3BQ8IVW6 561 aaPredicted RBP9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 SYNPOQ8N3V7 929 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 TMEM161BQ8NDZ6 487 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 CSGALNACT1Q8TDX6 532 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 C8orf76Q96K31 380 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 LLPHQ9BRT6 129 aaKnown RBP9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 MMTAG2Q9BU76 263 aaKnown RBP9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 RUSC1Q9BVN2 902 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 TIPINQ9BVW5 301 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 LIN7BQ9HAP6 207 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 LATS2Q9NRM7 1088 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 OBP2AQ9NY56 170 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 HSFX1Q9UBD0 423 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 YIPF1Q9Y548 306 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 ASB3Q9Y575 518 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 WDFY3Q8IZQ1 3526 aa9.35□□□□□ -0.91
COL4A3BP-206ENST00000508809 SCN1AP35498 2009 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 ZNF638Q14966 1978 aaKnown RBP9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 FRYQ5TBA9 3013 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 OR6C75A6NL08 312 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 SPECC1L-ADORA2AF8WAN1 911 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 SLC16A4O15374 487 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 CLDN3O15551 220 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 TYMPP19971 482 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 U2AF2P26368 475 aaKnown RBP eCLIP9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 SOX9P48436 509 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 KPNA1P52294 538 aaPredicted RBP9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 LIMK1P53667 647 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 EPHB3P54753 998 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 ORC1Q13415 861 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 MYBPC2Q14324 1141 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 IL17AQ16552 155 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 FOXD4L6Q3SYB3 417 aaPredicted RBP9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 ARHGAP29Q52LW3 1261 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 PEAR1Q5VY43 1037 aaPredicted RBP9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 KRT79Q5XKE5 535 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 FOXD4L3Q6VB84 417 aaPredicted RBP9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 DNAJB7Q7Z6W7 309 aaPredicted RBP9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 YAF2Q8IY57 180 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 DDX1Q92499 740 aaKnown RBP9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 PSMG2Q969U7 264 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 ALKBH8Q96BT7 664 aaKnown RBP9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 TSPAN18Q96SJ8 248 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 RAB34Q9BZG1 259 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 HAPLN2Q9GZV7 340 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 RBM12Q9NTZ6 932 aaKnown RBP9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 C2orf42Q9NWW7 574 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 TUBGCP4Q9UGJ1 667 aa9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 TIMM13Q9Y5L4 95 aaPredicted RBP9.34□□□□□ -0.91
COL4A3BP-206ENST00000508809 EML5Q05BV3 1969 aa9.33□□□□□ -0.92
COL4A3BP-206ENST00000508809 CCDC163A0A0D9SF12 145 aa9.33□□□□□ -0.92
COL4A3BP-206ENST00000508809 A0A1W2PP55 124 aa9.33□□□□□ -0.92
COL4A3BP-206ENST00000508809 SLC38A8A6NNN8 435 aa9.33□□□□□ -0.92
COL4A3BP-206ENST00000508809 LAD1O00515 517 aa9.33□□□□□ -0.92
COL4A3BP-206ENST00000508809 EIF1AYO14602 144 aaKnown RBP9.33□□□□□ -0.92
COL4A3BP-206ENST00000508809 FGF19O95750 216 aa9.33□□□□□ -0.92
COL4A3BP-206ENST00000508809 CLTAP09496 248 aa9.33□□□□□ -0.92
COL4A3BP-206ENST00000508809 PDIA4P13667 645 aaKnown RBP9.33□□□□□ -0.92
COL4A3BP-206ENST00000508809 PLS3P13797 630 aa9.33□□□□□ -0.92
COL4A3BP-206ENST00000508809 PAX3P23760 479 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms