RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 ZNF540Q8NDQ6 660 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 SPATA18Q8TC71 538 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 UTP15Q8TED0 518 aaKnown RBP4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 GIMAP1Q8WWP7 306 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 ASB15Q8WXK1 588 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 ANKS1AQ92625 1134 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 RABGGTAQ92696 567 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 PIGSQ96S52 555 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 ELF4Q99607 663 aaPredicted RBP4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 QRSL1Q9H0R6 528 aaKnown RBP4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 PRDM13Q9H4Q3 707 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 PNPLA8Q9NP80 782 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 FANCFQ9NPI8 374 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 HPF1Q9NWY4 346 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 ARHGAP26Q9UNA1 814 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 CNPY2Q9Y2B0 182 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 SPO11Q9Y5K1 396 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 NR2E3Q9Y5X4 410 aa4.72□□□□□ -1.65
SMARCA5-202ENST00000508573 TDRD9Q8NDG6 1382 aaKnown RBP4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 TMEM191CA6NGB0 347 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 FOXP2O15409 715 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 TBCAO75347 108 aaKnown RBP4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 SLC22A3O75751 556 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 FAM155BO75949 473 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 A1BGP04217 495 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 SCG2P13521 617 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 BMP5P22003 454 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 ACSL1P33121 698 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 PRPHP41219 470 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 MCM2P49736 904 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 SEC24CP53992 1094 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 NLRP5P59047 1200 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 VAMP2P63027 116 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 C17orf67Q0P5P2 114 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 MAP3K12Q12852 859 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 TMED1Q13445 227 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 EFR3AQ14156 821 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 KCNB1Q14721 858 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 TMEM132BQ14DG7 1078 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 UBE3CQ15386 1083 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 TAF7Q15545 349 aaPredicted RBP4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 ARHGAP44Q17R89 818 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 ANKDD1AQ495B1 522 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 C1orf141Q5JVX7 400 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 SNX30Q5VWJ9 437 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 SULT6B1Q6IMI4 303 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 Q6ZPA2 131 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 Q6ZRM9 215 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 RTN4RL1Q86UN2 441 aaPredicted RBP4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 C2CD5Q86YS7 1000 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 ANKRD35Q8N283 1001 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 TXLNBQ8N3L3 684 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 CISD2Q8N5K1 135 aaKnown RBP4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 Q8NFD4 153 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 GSDMBQ8TAX9 411 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 STYXQ8WUJ0 223 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 RPL10LQ96L21 214 aaKnown RBP4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 ACAP3Q96P50 834 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 FNBP1Q96RU3 617 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 EDEM3Q9BZQ6 932 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 NRDE2Q9H7Z3 1164 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 ZMAT4Q9H898 229 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 HOXC10Q9NYD6 342 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 SH3BGRL2Q9UJC5 107 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 SCAF8Q9UPN6 1271 aaKnown RBP4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 SNX8Q9Y5X2 465 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 PASKQ96RG2 1323 aa4.71□□□□□ -1.66
SMARCA5-202ENST00000508573 FAM234BA2RU67 622 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 CCDC154A6NI56 674 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 CCDC69A6NI79 296 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 UBE2CO00762 179 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 MTSS1O43312 755 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 HTRA2O43464 458 aaPredicted RBP4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 DTNBO60941 627 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 KRT37O76014 449 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 TMEM63AO94886 807 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 TNFRSF6BO95407 300 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 NR2F1P10589 423 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 RPS2P15880 293 aaKnown RBP4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 BTF3P20290 206 aaKnown RBP4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 CHMP24386 653 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 APEX1P27695 318 aaKnown RBP4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 ALDH3A2P51648 485 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 ADCY7P51828 1080 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 MAP2K6P52564 334 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 RNASE9P60153 205 aaKnown RBP4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 RAB1AP62820 205 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 HTRA4P83105 476 aaPredicted RBP4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 LRRC74AQ0VAA2 488 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 TFCP2Q12800 502 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 MRPL28Q13084 256 aaKnown RBP4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 ACVR2BQ13705 512 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 WTAPQ15007 396 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 FSCN1Q16658 493 aaKnown RBP4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 C3orf36Q3SXR2 165 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 CTXN3Q4LDR2 81 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 CT83Q5H943 113 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 RAB12Q6IQ22 244 aa4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 NAA16Q6N069 864 aaPredicted RBP4.7□□□□□ -1.66
SMARCA5-202ENST00000508573 SHQ1Q6PI26 577 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms