RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 NR3C1P04150 777 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 MYL1P05976 194 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 RETP07949 1114 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 DRD1P21728 446 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 AP3M2P53677 418 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 CDH8P55286 799 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 DLG4P78352 724 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 SLC7A9P82251 487 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 TAF10Q12962 218 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 PSMD2Q13200 908 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 CD101Q93033 1021 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 SPATA32Q96LK8 384 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 RNF38Q9H0F5 515 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 SDCBP2Q9H190 292 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 LINC00597Q9H2U6 94 aa13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 POLR3BQ9NW08 1133 aaPredicted RBP13.84□□□□□ -0.19
HMGCS1-205ENST00000508319 CCDC163A0A0D9SF12 145 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 FAM237AA0A1B0GTK4 181 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 ATG13O75143 517 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 RPN1P04843 607 aaKnown RBP13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 PPP3CCP48454 512 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 PXNP49023 591 aaPredicted RBP13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 NDUFA8P51970 172 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 KRT85P78386 507 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 GAB4Q2WGN9 574 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 ZACNQ401N2 412 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 FBXO43Q4G163 708 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 ZNF667Q5HYK9 610 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 FAM35AQ86V20 835 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 CPQQ9Y646 472 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 MYH10P35580 1976 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 MYOFQ9NZM1 2061 aa13.83□□□□□ -0.2
HMGCS1-205ENST00000508319 PRR5-ARHGAP8B1AHC4 643 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 CLSTN1O94985 981 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 NFATC1O95644 943 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 CYP17A1P05093 508 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 OPRD1P41143 372 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 SYKP43405 635 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 ARHGAP8P85298 464 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 IFRD2Q12894 506 aaPredicted RBP13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 C1orf220Q5T0J3 134 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 PAQR9Q6ZVX9 377 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 FUKQ8N0W3 1084 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 FAM160A2Q8N612 972 aaPredicted RBP13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 RPLP0P6Q8NHW5 317 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 TMC2Q8TDI7 906 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 GAB3Q8WWW8 586 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 EXOC4Q96A65 974 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 SLITRK1Q96PX8 696 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 KCNK16Q96T55 309 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 DMAP1Q9NPF5 467 aaPredicted RBP13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 KRT82Q9NSB4 513 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 SEMA4GQ9NTN9 838 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 SMPD4Q9NXE4 827 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 HMGXB4Q9UGU5 601 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 CDV3Q9UKY7 258 aaKnown RBP13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 SLC8A2Q9UPR5 921 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 ATP8B3O60423 1300 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 LAMA1P25391 3075 aa13.82□□□□□ -0.2
HMGCS1-205ENST00000508319 TNFRSF10BO14763 440 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 SCAMP3O14828 347 aaKnown RBP13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 RHOBTB3O94955 611 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 ABL1P00519 1130 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 ASS1P00966 412 aaKnown RBP13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 YWHAQP27348 245 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 ASPAP45381 313 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 SLC5A3P53794 718 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 ATXN1P54253 815 aaKnown RBP13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 DPYDQ12882 1025 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 CEP135Q66GS9 1140 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 CEP68Q76N32 757 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 SV2AQ7L0J3 742 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 SYT13Q7L8C5 426 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 FILIP1Q7Z7B0 1213 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 NUP93Q8N1F7 819 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 CAMKK1Q8N5S9 505 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 KIAA1958Q8N8K9 716 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 SCAMP5Q8TAC9 235 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 OVCA2Q8WZ82 227 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 SMARCD1Q96GM5 515 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 TNIP3Q96KP6 325 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 ZFRQ96KR1 1074 aaKnown RBP13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 HHIPQ96QV1 700 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 IL37Q9NZH6 218 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 TRAF3IP3Q9Y228 551 aa13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 CNOT1A5YKK6 2376 aaKnown RBP13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 TPRP12270 2363 aaKnown RBP13.81□□□□□ -0.2
HMGCS1-205ENST00000508319 FAM92AA1XBS5 289 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 IKBKBO14920 756 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 MAPK13O15264 365 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 CALUO43852 315 aaPredicted RBP13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 RPP40O75818 363 aaKnown RBP13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 AKAP3O75969 853 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 RTN3O95197 1032 aaPredicted RBP13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 HLA-DRAP01903 254 aa13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 MBL2P11226 248 aaPredicted RBP13.8□□□□□ -0.2
HMGCS1-205ENST00000508319 P4HA1P13674 534 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms