RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 CACHD1Q5VU97 1274 aa6.13□□□□□ -1.43
DHFR-204ENST00000508282 NAPRTQ6XQN6 538 aa6.13□□□□□ -1.43
DHFR-204ENST00000508282 DPY19L3Q6ZPD9 716 aa6.13□□□□□ -1.43
DHFR-204ENST00000508282 DGKHQ86XP1 1220 aa6.13□□□□□ -1.43
DHFR-204ENST00000508282 MSLNLQ96KJ4 702 aa6.13□□□□□ -1.43
DHFR-204ENST00000508282 LENG8Q96PV6 779 aaPredicted RBP6.13□□□□□ -1.43
DHFR-204ENST00000508282 THAP7Q9BT49 309 aaPredicted RBP6.13□□□□□ -1.43
DHFR-204ENST00000508282 TRIM5Q9C035 493 aa6.13□□□□□ -1.43
DHFR-204ENST00000508282 CHST8Q9H2A9 424 aa6.13□□□□□ -1.43
DHFR-204ENST00000508282 CCNL1Q9UK58 526 aaPredicted RBP6.13□□□□□ -1.43
DHFR-204ENST00000508282 CCP110O43303 1012 aa6.12□□□□□ -1.43
DHFR-204ENST00000508282 RRP9O43818 475 aaKnown RBP6.12□□□□□ -1.43
DHFR-204ENST00000508282 PDE8BO95263 885 aa6.12□□□□□ -1.43
DHFR-204ENST00000508282 RASAL1O95294 804 aa6.12□□□□□ -1.43
DHFR-204ENST00000508282 TXNP10599 105 aaKnown RBP6.12□□□□□ -1.43
DHFR-204ENST00000508282 PTDSS1P48651 473 aaKnown RBP6.12□□□□□ -1.43
DHFR-204ENST00000508282 PROSER3Q2NL68 480 aa6.12□□□□□ -1.43
DHFR-204ENST00000508282 FCRL6Q6DN72 434 aa6.12□□□□□ -1.43
DHFR-204ENST00000508282 ZNF782Q6ZMW2 699 aaPredicted RBP6.12□□□□□ -1.43
DHFR-204ENST00000508282 SEMA6DQ8NFY4 1073 aa6.12□□□□□ -1.43
DHFR-204ENST00000508282 PRR25Q96S07 402 aa6.12□□□□□ -1.43
DHFR-204ENST00000508282 APOL5Q9BWW9 433 aa6.12□□□□□ -1.43
DHFR-204ENST00000508282 RGS17Q9UGC6 210 aaPredicted RBP6.12□□□□□ -1.43
DHFR-204ENST00000508282 HDAC9Q9UKV0 1011 aa6.12□□□□□ -1.43
DHFR-204ENST00000508282 AP4M1O00189 453 aa6.11□□□□□ -1.43
DHFR-204ENST00000508282 DLDP09622 509 aaKnown RBP6.11□□□□□ -1.43
DHFR-204ENST00000508282 UQCRC1P31930 480 aa6.11□□□□□ -1.43
DHFR-204ENST00000508282 ITGA8P53708 1063 aa6.11□□□□□ -1.43
DHFR-204ENST00000508282 E2F1Q01094 437 aa6.11□□□□□ -1.43
DHFR-204ENST00000508282 SRSF4Q08170 494 aaKnown RBP6.11□□□□□ -1.43
DHFR-204ENST00000508282 ARHGEF7Q14155 803 aa6.11□□□□□ -1.43
DHFR-204ENST00000508282 TBC1D25Q3MII6 688 aa6.11□□□□□ -1.43
DHFR-204ENST00000508282 L1TD1Q5T7N2 865 aaKnown RBP6.11□□□□□ -1.43
DHFR-204ENST00000508282 UNC13DQ70J99 1090 aa6.11□□□□□ -1.43
DHFR-204ENST00000508282 ABHD11Q8NFV4 315 aa6.11□□□□□ -1.43
DHFR-204ENST00000508282 CYP2W1Q8TAV3 490 aa6.11□□□□□ -1.43
DHFR-204ENST00000508282 DDB2Q92466 427 aa6.11□□□□□ -1.43
DHFR-204ENST00000508282 RSPRY1Q96DX4 576 aa6.11□□□□□ -1.43
DHFR-204ENST00000508282 DPCDQ9BVM2 203 aaPredicted RBP6.11□□□□□ -1.43
DHFR-204ENST00000508282 BTBD1Q9H0C5 482 aa6.11□□□□□ -1.43
DHFR-204ENST00000508282 DHX36Q9H2U1 1008 aaKnown RBP6.11□□□□□ -1.43
DHFR-204ENST00000508282 DDX21Q9NR30 783 aaKnown RBP eCLIP6.11□□□□□ -1.43
DHFR-204ENST00000508282 MID2Q9UJV3 735 aa6.11□□□□□ -1.43
DHFR-204ENST00000508282 DRG1Q9Y295 367 aaKnown RBP6.11□□□□□ -1.43
DHFR-204ENST00000508282 TISP43B9A030 160 aa6.1□□□□□ -1.43
DHFR-204ENST00000508282 F8W8V4 182 aa6.1□□□□□ -1.43
DHFR-204ENST00000508282 SMIM22K7EJ46 135 aa6.1□□□□□ -1.43
DHFR-204ENST00000508282 RAB27BO00194 218 aa6.1□□□□□ -1.43
DHFR-204ENST00000508282 CD3EAPO15446 510 aaKnown RBP6.1□□□□□ -1.43
DHFR-204ENST00000508282 RGS10O43665 173 aa6.1□□□□□ -1.43
DHFR-204ENST00000508282 PRKCBP05771 671 aa6.1□□□□□ -1.43
DHFR-204ENST00000508282 ACVR2AP27037 513 aa6.1□□□□□ -1.43
DHFR-204ENST00000508282 PRKAR1BP31321 381 aa6.1□□□□□ -1.43
DHFR-204ENST00000508282 ZNF750Q32MQ0 723 aa6.1□□□□□ -1.43
DHFR-204ENST00000508282 ZKSCAN2Q63HK3 967 aa6.1□□□□□ -1.43
DHFR-204ENST00000508282 MTHFD1LQ6UB35 978 aa6.1□□□□□ -1.43
DHFR-204ENST00000508282 KIRREL2Q6UWL6 708 aa6.1□□□□□ -1.43
DHFR-204ENST00000508282 ZBTB45Q96K62 511 aaPredicted RBP6.1□□□□□ -1.43
DHFR-204ENST00000508282 KRTAP17-1Q9BYP8 105 aa6.1□□□□□ -1.43
DHFR-204ENST00000508282 CHPF2Q9P2E5 772 aa6.1□□□□□ -1.43
DHFR-204ENST00000508282 CELA2AP08217 269 aa6.09□□□□□ -1.43
DHFR-204ENST00000508282 HGFP14210 728 aa6.09□□□□□ -1.43
DHFR-204ENST00000508282 FPR3P25089 353 aa6.09□□□□□ -1.43
DHFR-204ENST00000508282 GKP32189 559 aa6.09□□□□□ -1.43
DHFR-204ENST00000508282 CPT1AP50416 773 aa6.09□□□□□ -1.43
DHFR-204ENST00000508282 HTRA4P83105 476 aaPredicted RBP6.09□□□□□ -1.43
DHFR-204ENST00000508282 HOXA4Q00056 320 aaPredicted RBP6.09□□□□□ -1.43
DHFR-204ENST00000508282 TIAL1Q01085 375 aaKnown RBP eCLIP6.09□□□□□ -1.43
DHFR-204ENST00000508282 SLC10A2Q12908 348 aaPredicted RBP6.09□□□□□ -1.43
DHFR-204ENST00000508282 SLC29A2Q14542 456 aa6.09□□□□□ -1.43
DHFR-204ENST00000508282 RNASE12Q5GAN4 147 aaKnown RBP6.09□□□□□ -1.43
DHFR-204ENST00000508282 PRAMEF17Q5VTA0 474 aa6.09□□□□□ -1.43
DHFR-204ENST00000508282 TRIM72Q6ZMU5 477 aa6.09□□□□□ -1.43
DHFR-204ENST00000508282 KRT78Q8N1N4 520 aa6.09□□□□□ -1.43
DHFR-204ENST00000508282 VN1R3Q9BXE9 311 aa6.09□□□□□ -1.43
DHFR-204ENST00000508282 NUP62CLQ9H1M0 184 aa6.09□□□□□ -1.43
DHFR-204ENST00000508282 DKK4Q9UBT3 224 aa6.09□□□□□ -1.43
DHFR-204ENST00000508282 ITGB1BP2Q9UKP3 347 aa6.09□□□□□ -1.43
DHFR-204ENST00000508282 USP22Q9UPT9 525 aa6.09□□□□□ -1.43
DHFR-204ENST00000508282 PMPCBO75439 489 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 PIAS2O75928 621 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 LATS1O95835 1130 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 MT-ND5P03915 603 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 RPL17P18621 184 aaKnown RBP6.08□□□□□ -1.44
DHFR-204ENST00000508282 BTF3P20290 206 aaKnown RBP6.08□□□□□ -1.44
DHFR-204ENST00000508282 EPHA3P29320 983 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 CARSP49589 748 aaKnown RBP6.08□□□□□ -1.44
DHFR-204ENST00000508282 TIRAPP58753 221 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 PSG6Q00889 435 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 ZNF66Q6ZN08 573 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 YAF2Q8IY57 180 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 TERB1Q8NA31 727 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 PHKBQ93100 1093 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 TTC17Q96AE7 1141 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 CTHRC1Q96CG8 243 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 SNX22Q96L94 193 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 STRBPQ96SI9 672 aaKnown RBP6.08□□□□□ -1.44
DHFR-204ENST00000508282 FLRT1Q9NZU1 646 aa6.08□□□□□ -1.44
DHFR-204ENST00000508282 PCSK5Q92824 1860 aa6.07□□□□□ -1.44
DHFR-204ENST00000508282 AGPSO00116 658 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms