RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 RPLP2P05387 115 aaKnown RBP18.5■□□□□ 0.55
SFXN1-208ENST00000507823 GNL1P36915 607 aaPredicted RBP18.5■□□□□ 0.55
SFXN1-208ENST00000507823 TAF5Q15542 800 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 BOLA3Q53S33 107 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 TTC19Q6DKK2 380 aaPredicted RBP18.5■□□□□ 0.55
SFXN1-208ENST00000507823 PRUNE1Q86TP1 453 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 BCAS4Q8TDM0 211 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 DNAI2Q9GZS0 605 aa18.5■□□□□ 0.55
SFXN1-208ENST00000507823 FARP1Q9Y4F1 1045 aaPredicted RBP18.5■□□□□ 0.55
SFXN1-208ENST00000507823 PTPN9P43378 593 aa18.49■□□□□ 0.55
SFXN1-208ENST00000507823 RGS7P49802 495 aa18.49■□□□□ 0.55
SFXN1-208ENST00000507823 SH3PXD2AQ5TCZ1 1133 aa18.49■□□□□ 0.55
SFXN1-208ENST00000507823 SLC26A9Q7LBE3 791 aa18.49■□□□□ 0.55
SFXN1-208ENST00000507823 EPS8L3Q8TE67 593 aaKnown RBP18.49■□□□□ 0.55
SFXN1-208ENST00000507823 CENPIQ92674 756 aaPredicted RBP18.49■□□□□ 0.55
SFXN1-208ENST00000507823 HSFY1Q96LI6 401 aa18.49■□□□□ 0.55
SFXN1-208ENST00000507823 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.49■□□□□ 0.55
SFXN1-208ENST00000507823 ZSCAN5DPP0CG00 497 aa18.49■□□□□ 0.55
SFXN1-208ENST00000507823 LILRA4P59901 499 aa18.49■□□□□ 0.55
SFXN1-208ENST00000507823 PDK2Q15119 407 aa18.49■□□□□ 0.55
SFXN1-208ENST00000507823 APPL2Q8NEU8 664 aa18.49■□□□□ 0.55
SFXN1-208ENST00000507823 CHST12Q9NRB3 414 aa18.49■□□□□ 0.55
SFXN1-208ENST00000507823 C6orf222P0C671 652 aaPredicted RBP18.48■□□□□ 0.55
SFXN1-208ENST00000507823 DPYSL3Q14195 570 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 C15orf59Q2T9L4 293 aaPredicted RBP18.48■□□□□ 0.55
SFXN1-208ENST00000507823 MFSD14CQ5VZR4 134 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 TRIB2Q92519 343 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 TMEM121Q9BTD3 319 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 SENP6Q9GZR1 1112 aaPredicted RBP18.48■□□□□ 0.55
SFXN1-208ENST00000507823 CDY2AQ9Y6F7 541 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 CASP8AP2Q9UKL3 1982 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 MDM4O15151 490 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 LMO2P25791 158 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 ACADSBP45954 432 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 FCGRTP55899 365 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 MGAT3Q09327 533 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 GPS1Q13098 491 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 CBLBQ13191 982 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 KYNUQ16719 465 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 NBPF20Q3BBV1 942 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 PCGF5Q86SE9 256 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 SERINC5Q86VE9 423 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 HAUS1Q96CS2 278 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 FAF2Q96CS3 445 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 SNX25Q9H3E2 840 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 LGALS13Q9UHV8 139 aa18.48■□□□□ 0.55
SFXN1-208ENST00000507823 PRPSAP2O60256 369 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 ACSL3O95573 720 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 ETS1P14921 441 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 TFDP2Q14188 446 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 NOMO1Q15155 1222 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 RAB6CQ53S08 254 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 FAM47CQ5HY64 1035 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 GNASQ5JWF2 1037 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 HSPH1Q92598 858 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 HHIPL1Q96JK4 782 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 TNIP3Q96KP6 325 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 PWWP2AQ96N64 755 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 RBM15Q96T37 977 aaKnown RBP eCLIP18.47■□□□□ 0.551e-6■□□□□ 8.7
SFXN1-208ENST00000507823 RAB6CQ9H0N0 254 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 RNF19AQ9NV58 838 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 SMAPO00193 183 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 GABRDO14764 452 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 HCRTO43612 131 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 TRAPPC3O43617 180 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 IL4RP24394 825 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 SDC4P31431 198 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 MAGEA4P43358 317 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 IFI35P80217 286 aaPredicted RBP18.47■□□□□ 0.55
SFXN1-208ENST00000507823 TWF2Q6IBS0 349 aaKnown RBP18.47■□□□□ 0.55
SFXN1-208ENST00000507823 GDF6Q6KF10 455 aaPredicted RBP18.47■□□□□ 0.55
SFXN1-208ENST00000507823 RFX6Q8HWS3 928 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 ADGRF2Q8IZF7 708 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 PRCCQ92733 491 aaPredicted RBP18.47■□□□□ 0.55
SFXN1-208ENST00000507823 CFAP57Q96MR6 1250 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 RNF157Q96PX1 679 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 HNRNPABQ99729 332 aaKnown RBP18.47■□□□□ 0.55
SFXN1-208ENST00000507823 GOLGA2P5Q9HBQ8 144 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.47■□□□□ 0.55
SFXN1-208ENST00000507823 EURLQ9NYK6 297 aa18.47■□□□□ 0.55
SFXN1-208ENST00000507823 SGK1O00141 431 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 PIK3R2O00459 728 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 SEPT4O43236 478 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 HUS1O60921 280 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 ADAMTS4O75173 837 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 CCDC130P13994 396 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 CDH6P55285 790 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 ZNF618Q5T7W0 954 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 RSPH3Q86UC2 560 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 OSTM1Q86WC4 334 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 SCUBE3Q8IX30 993 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 GSTCDQ8NEC7 633 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 TTC25Q96NG3 672 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 LPIN3Q9BQK8 851 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 SAE1Q9UBE0 346 aaPredicted RBP18.46■□□□□ 0.55
SFXN1-208ENST00000507823 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.46■□□□□ 0.55
SFXN1-208ENST00000507823 TLDC2A0PJX2 215 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 M0QZ92 97 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 ALOX15BO15296 676 aa18.46■□□□□ 0.55
SFXN1-208ENST00000507823 PECAM1P16284 738 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms