RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 MYRFLQ96LU7 910 aa21.17■□□□□ 0.98
USP53-203ENST00000507597 PLXNA3P51805 1871 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 BEST1O76090 585 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 CDH5P33151 784 aaPredicted RBP21.16■□□□□ 0.98
USP53-203ENST00000507597 PSEN1P49768 467 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 ADKP55263 362 aaKnown RBP21.16■□□□□ 0.98
USP53-203ENST00000507597 SMAD4Q13485 552 aaKnown RBP21.16■□□□□ 0.98
USP53-203ENST00000507597 ARHGAP15Q53QZ3 475 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 DENND1BQ6P3S1 775 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 ERICH1Q86X53 443 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 SMRP1Q8NCR6 262 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 STKLD1Q8NE28 680 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 ZMIZ2Q8NF64 920 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 GOLGA1Q92805 767 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 FBXO32Q969P5 355 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 ZNF707Q96C28 371 aaPredicted RBP21.16■□□□□ 0.98
USP53-203ENST00000507597 ZSWIM1Q9BR11 485 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 TRIM62Q9BVG3 475 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 TTLL2Q9BWV7 592 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 S1PR5Q9H228 398 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 CNGB3Q9NQW8 809 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 TRPM5Q9NZQ8 1165 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 ATG2AQ2TAZ0 1938 aa21.16■□□□□ 0.98
USP53-203ENST00000507597 SSU72P8A0A1W2PR75 194 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 RHOP08100 348 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 NSFP46459 744 aaKnown RBP21.15■□□□□ 0.98
USP53-203ENST00000507597 GPR15P49685 360 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 KIF11P52732 1056 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 CACNA2D1P54289 1103 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 CDK17Q00537 523 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 FMO1Q01740 532 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 DLX2Q07687 328 aaPredicted RBP21.15■□□□□ 0.98
USP53-203ENST00000507597 LEXMQ3ZCV2 418 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 SDHAF4Q5VUM1 108 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 GRASPQ7Z6J2 395 aaPredicted RBP21.15■□□□□ 0.98
USP53-203ENST00000507597 ZDHHC17Q8IUH5 632 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 PASD1Q8IV76 773 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 SPC24Q8NBT2 197 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 MRPS31Q92665 395 aaKnown RBP21.15■□□□□ 0.98
USP53-203ENST00000507597 PPP1R13BQ96KQ4 1090 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 PANX2Q96RD6 677 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.15■□□□□ 0.98
USP53-203ENST00000507597 APOL5Q9BWW9 433 aa21.15■□□□□ 0.98
USP53-203ENST00000507597 WDR6Q9NNW5 1121 aaKnown RBP21.15■□□□□ 0.98
USP53-203ENST00000507597 TLR8Q9NR97 1041 aaKnown RBP21.15■□□□□ 0.98
USP53-203ENST00000507597 DNMT3BQ9UBC3 853 aaKnown RBP21.15■□□□□ 0.98
USP53-203ENST00000507597 CLUHO75153 1309 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 SOBPA7XYQ1 873 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 TNFRSF10BO14763 440 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 CALCAP01258 141 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 GZMAP12544 262 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 MYL4P12829 197 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 DDX6P26196 483 aaKnown RBP eCLIP21.14■□□□□ 0.97
USP53-203ENST00000507597 TKTL1P51854 596 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 EPHA5P54756 1037 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 IFRD2Q12894 506 aaPredicted RBP21.14■□□□□ 0.97
USP53-203ENST00000507597 RAB41Q5JT25 222 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 TADA2BQ86TJ2 420 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 SCML4Q8N228 414 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 GPR152Q8TDT2 470 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 SLC20A1Q8WUM9 679 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 IRGQQ8WZA9 623 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 CCDC42Q96M95 316 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 CDK5RAP1Q96SZ6 601 aaKnown RBP21.14■□□□□ 0.97
USP53-203ENST00000507597 IL37Q9NZH6 218 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 STRIP2Q9ULQ0 834 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 SCML2Q9UQR0 700 aa21.14■□□□□ 0.97
USP53-203ENST00000507597 MRPS23Q9Y3D9 190 aaKnown RBP21.14■□□□□ 0.97
USP53-203ENST00000507597 NCANO14594 1321 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 HHLA1C9JL84 531 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 H3BQ06 376 aaPredicted RBP21.13■□□□□ 0.97
USP53-203ENST00000507597 ZBED1O96006 694 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 CYP1A1P04798 512 aaPredicted RBP21.13■□□□□ 0.97
USP53-203ENST00000507597 SKILP12757 684 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 PFKLP17858 780 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 FSHRP23945 695 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 GABRR2P28476 465 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 SSTR3P32745 418 aaPredicted RBP21.13■□□□□ 0.97
USP53-203ENST00000507597 PDCLQ13371 301 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 PMF1Q6P1K2 205 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 TMEM110Q86TL2 294 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 MON1AQ86VX9 555 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 C1orf131Q8NDD1 294 aaKnown RBP21.13■□□□□ 0.97
USP53-203ENST00000507597 C18orf8Q96DM3 657 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 SLC4A5Q9BY07 1137 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 ATXN3LQ9H3M9 355 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.13■□□□□ 0.97
USP53-203ENST00000507597 WDR35Q9P2L0 1181 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 THEGQ9P2T0 379 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 USP3Q9Y6I4 520 aa21.13■□□□□ 0.97
USP53-203ENST00000507597 ZFP37Q9Y6Q3 630 aaPredicted RBP21.13■□□□□ 0.97
USP53-203ENST00000507597 FAM92AA1XBS5 289 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 CALB1P05937 261 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 LCP1P13796 627 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 HMGA1P17096 107 aaKnown RBP21.12■□□□□ 0.97
USP53-203ENST00000507597 RPL34P49207 117 aaKnown RBP21.12■□□□□ 0.97
USP53-203ENST00000507597 RGS7P49802 495 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 NOMO3P69849 1222 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 TAF10Q12962 218 aa21.12■□□□□ 0.97
USP53-203ENST00000507597 MAPK8IP2Q13387 824 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms