RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 UBE4AQ14139 1066 aa5.7□□□□□ -1.5
LINC01088-203ENST00000507476 BRDTQ58F21 947 aaPredicted RBP5.7□□□□□ -1.5
LINC01088-203ENST00000507476 CAND1Q86VP6 1230 aaKnown RBP5.7□□□□□ -1.5
LINC01088-203ENST00000507476 ABRAQ8N0Z2 381 aa5.7□□□□□ -1.5
LINC01088-203ENST00000507476 NRACQ8N912 160 aa5.7□□□□□ -1.5
LINC01088-203ENST00000507476 HPS3Q969F9 1004 aa5.7□□□□□ -1.5
LINC01088-203ENST00000507476 CGRRF1Q99675 332 aa5.7□□□□□ -1.5
LINC01088-203ENST00000507476 KRTAP2-2Q9BYT5 123 aa5.7□□□□□ -1.5
LINC01088-203ENST00000507476 ARMT1Q9H993 441 aa5.7□□□□□ -1.5
LINC01088-203ENST00000507476 ASIC5Q9NY37 505 aa5.7□□□□□ -1.5
LINC01088-203ENST00000507476 CPA4Q9UI42 421 aa5.7□□□□□ -1.5
LINC01088-203ENST00000507476 STXBP5LQ9Y2K9 1186 aa5.7□□□□□ -1.5
LINC01088-203ENST00000507476 SNX14Q9Y5W7 946 aa5.7□□□□□ -1.5
LINC01088-203ENST00000507476 AP4M1O00189 453 aa5.69□□□□□ -1.5
LINC01088-203ENST00000507476 PRKCBP05771 671 aa5.69□□□□□ -1.5
LINC01088-203ENST00000507476 MYL1P05976 194 aa5.69□□□□□ -1.5
LINC01088-203ENST00000507476 KCNA3P22001 575 aa5.69□□□□□ -1.5
LINC01088-203ENST00000507476 DGKEP52429 567 aa5.69□□□□□ -1.5
LINC01088-203ENST00000507476 LINC00205P59089 165 aa5.69□□□□□ -1.5
LINC01088-203ENST00000507476 IRX6P78412 446 aaPredicted RBP5.69□□□□□ -1.5
LINC01088-203ENST00000507476 E2F1Q01094 437 aa5.69□□□□□ -1.5
LINC01088-203ENST00000507476 MEX3CQ5U5Q3 659 aaKnown RBP5.69□□□□□ -1.5
LINC01088-203ENST00000507476 SERPINA13PQ6UXR4 307 aa5.69□□□□□ -1.5
LINC01088-203ENST00000507476 ZNF813Q6ZN06 617 aa5.69□□□□□ -1.5
LINC01088-203ENST00000507476 COQ8BQ96D53 544 aa5.69□□□□□ -1.5
LINC01088-203ENST00000507476 MTFMTQ96DP5 389 aaKnown RBP5.69□□□□□ -1.5
LINC01088-203ENST00000507476 PRR25Q96S07 402 aa5.69□□□□□ -1.5
LINC01088-203ENST00000507476 P2RX7Q99572 595 aaKnown RBP5.69□□□□□ -1.5
LINC01088-203ENST00000507476 NAP1L4Q99733 375 aaKnown RBP5.69□□□□□ -1.5
LINC01088-203ENST00000507476 UBE2Q2LH0YL09 131 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 SOCS2O14508 198 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 INSIG1O15503 277 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 WDHD1O75717 1129 aaPredicted RBP5.68□□□□□ -1.5
LINC01088-203ENST00000507476 ALDH1L1O75891 902 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 CYP2C9P11712 490 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 PAX3P23760 479 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 PLCD1P51178 756 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 WNT3P56703 355 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 PSG6Q00889 435 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 C4orf46Q504U0 113 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 ATAT1Q5SQI0 421 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 IRF2BP2Q7Z5L9 587 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 BCDIN3DQ7Z5W3 292 aaKnown RBP5.68□□□□□ -1.5
LINC01088-203ENST00000507476 IZUMO1Q8IYV9 350 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 SAMD14Q8IZD0 417 aaPredicted RBP5.68□□□□□ -1.5
LINC01088-203ENST00000507476 PIGOQ8TEQ8 1089 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 TSR2Q969E8 191 aaKnown RBP5.68□□□□□ -1.5
LINC01088-203ENST00000507476 CHMP4CQ96CF2 233 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 MAP3K14Q99558 947 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 FAM118BQ9BPY3 351 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 DPCDQ9BVM2 203 aaPredicted RBP5.68□□□□□ -1.5
LINC01088-203ENST00000507476 TCF7L1Q9HCS4 588 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 TERF2IPQ9NYB0 399 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 STAP2Q9UGK3 403 aa5.68□□□□□ -1.5
LINC01088-203ENST00000507476 ADAM10O14672 748 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 FGBP02675 491 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 THP07101 528 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 GNALP38405 381 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 RAPGEF1Q13905 1077 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 ZNF268Q14587 947 aaPredicted RBP5.67□□□□□ -1.5
LINC01088-203ENST00000507476 FAM187BQ17R55 369 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 KLHL22Q53GT1 634 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 SHC4Q6S5L8 630 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 ZBTB46Q86UZ6 589 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 GAS2L3Q86XJ1 694 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 GRAMD1CQ8IYS0 662 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 DNAJC5GQ8N7S2 189 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 C16orf52Q8NHV5 167 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 PNISRQ8TF01 805 aaKnown RBP5.67□□□□□ -1.5
LINC01088-203ENST00000507476 MMS19Q96T76 1030 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 NUP88Q99567 741 aaPredicted RBP5.67□□□□□ -1.5
LINC01088-203ENST00000507476 EFHD1Q9BUP0 239 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 ZNF580Q9UK33 172 aa5.67□□□□□ -1.5
LINC01088-203ENST00000507476 A0A087WWL8 130 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 NPHP1O15259 732 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 TSPAN6O43657 245 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 SNHG28P0DPA3 235 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 MYCLP12524 364 aaPredicted RBP5.66□□□□□ -1.5
LINC01088-203ENST00000507476 CCKBRP32239 447 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 RAB1AP62820 205 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 SATB1Q01826 763 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 KRT17Q04695 432 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 HLTFQ14527 1009 aaKnown RBP eCLIP5.66□□□□□ -1.5
LINC01088-203ENST00000507476 TTF1Q15361 905 aaPredicted RBP5.66□□□□□ -1.5
LINC01088-203ENST00000507476 MAP9Q49MG5 647 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 RUSC1-AS1Q66K80 236 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 MRPL10Q7Z7H8 261 aaKnown RBP5.66□□□□□ -1.5
LINC01088-203ENST00000507476 SLC15A4Q8N697 577 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 PAF1Q8N7H5 531 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 ZNF398Q8TD17 642 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 TMEM171Q8WVE6 324 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 SLC12A5Q9H2X9 1139 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 TRMT13Q9NUP7 481 aaKnown RBP5.66□□□□□ -1.5
LINC01088-203ENST00000507476 MTMR4Q9NYA4 1195 aa5.66□□□□□ -1.5
LINC01088-203ENST00000507476 THRAP3Q9Y2W1 955 aaKnown RBP5.66□□□□□ -1.5
LINC01088-203ENST00000507476 A0A088AWK7 358 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 LY6G6EA0A0G2JKS1 128 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 MYO1CO00159 1063 aa5.65□□□□□ -1.5
LINC01088-203ENST00000507476 LDHAP00338 332 aaKnown RBP5.65□□□□□ -1.5
LINC01088-203ENST00000507476 FGAP02671 866 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms