RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 RCCD1A6NED2 376 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 ATMINO43313 823 aaPredicted RBP14.95□□□□□ -0.02
RNF4-208ENST00000507247 C8AP07357 584 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 LCP1P13796 627 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 ABCB4P21439 1286 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 MAGEA1P43355 309 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 GABRB2P47870 512 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 SLC5A3P53794 718 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 GALCP54803 685 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 RPL10AP62906 217 aaKnown RBP14.95□□□□□ -0.02
RNF4-208ENST00000507247 C1QBPQ07021 282 aaKnown RBP14.95□□□□□ -0.02
RNF4-208ENST00000507247 ADIGQ0VDE8 80 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 ADGRE1Q14246 886 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 SPA17Q15506 151 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 TCEAL5Q5H9L2 206 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 LLGL2Q6P1M3 1020 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 TMEM110Q86TL2 294 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 VN1R2Q8NFZ6 395 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 SLC7A14Q8TBB6 771 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 GIPC2Q8TF65 315 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 CLEC4CQ8WTT0 213 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 SPATA17Q96L03 361 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 NOX5Q96PH1 765 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 NSUN3Q9H649 340 aaKnown RBP14.95□□□□□ -0.02
RNF4-208ENST00000507247 CYLDQ9NQC7 956 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 MAN1C1Q9NR34 630 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 ADAM22Q9P0K1 906 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 PCDHA13Q9Y5I0 950 aa14.95□□□□□ -0.02
RNF4-208ENST00000507247 NCANO14594 1321 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 PAPSS1O43252 624 aaPredicted RBP14.94□□□□□ -0.02
RNF4-208ENST00000507247 C1RP00736 705 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 H2AFZP0C0S5 128 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 ACADSBP45954 432 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 TKTL1P51854 596 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 USP46P62068 366 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 TWF1Q12792 350 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 HYAL1Q12794 435 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 MTMR3Q13615 1198 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 KCNC3Q14003 757 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 FAM183BPQ6ZVS7 135 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 H2AFVQ71UI9 128 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 PHLDB2Q86SQ0 1253 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 XYLT1Q86Y38 959 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 SCAMP5Q8TAC9 235 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 IPO4Q8TEX9 1081 aaKnown RBP14.94□□□□□ -0.02
RNF4-208ENST00000507247 NDRG1Q92597 394 aaKnown RBP14.94□□□□□ -0.02
RNF4-208ENST00000507247 ZNF653Q96CK0 615 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 C18orf8Q96DM3 657 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 ARHGEF26Q96DR7 871 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 PIWIL1Q96J94 861 aaKnown RBP14.94□□□□□ -0.02
RNF4-208ENST00000507247 ULBP1Q9BZM6 244 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 THAP2Q9H0W7 228 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 LRRC4Q9HBW1 653 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 LMCD1Q9NZU5 365 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 MTCH2Q9Y6C9 303 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 CDH23Q9H251 3354 aa14.94□□□□□ -0.02
RNF4-208ENST00000507247 DOCK6Q96HP0 2047 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 TCRBV5S1A1TA0A578 114 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 ANKRD62A6NC57 917 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 SLC38A8A6NNN8 435 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 IPO7O95373 1038 aaKnown RBP14.93□□□□□ -0.02
RNF4-208ENST00000507247 CALB1P05937 261 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 RRM1P23921 792 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 ALDH1A3P47895 512 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 VAV2P52735 878 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 GSCP56915 257 aaPredicted RBP14.93□□□□□ -0.02
RNF4-208ENST00000507247 KRT83P78385 493 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 IFRD2Q12894 506 aaPredicted RBP14.93□□□□□ -0.02
RNF4-208ENST00000507247 HS1BP3Q53T59 392 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 C10orf76Q5T2E6 689 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 LIN9Q5TKA1 542 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 PPP1R2P3Q6NXS1 205 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 CCDC149Q6ZUS6 474 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 DENND5BQ6ZUT9 1274 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 NUP93Q8N1F7 819 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 MSANTD4Q8NCY6 345 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 FEZF2Q8TBJ5 459 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 VCPIP1Q96JH7 1222 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 CDCA3Q99618 268 aaPredicted RBP14.93□□□□□ -0.02
RNF4-208ENST00000507247 CDX2Q99626 313 aaPredicted RBP14.93□□□□□ -0.02
RNF4-208ENST00000507247 MIS12Q9H081 205 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 PLEKHA4Q9H4M7 779 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 IGFLR1Q9H665 355 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 SYNCQ9H7C4 482 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 IL37Q9NZH6 218 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 CHORDC1Q9UHD1 332 aaPredicted RBP14.93□□□□□ -0.02
RNF4-208ENST00000507247 USP3Q9Y6I4 520 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 DENND4CQ5VZ89 1909 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 C2orf16Q68DN1 1984 aa14.93□□□□□ -0.02
RNF4-208ENST00000507247 ANAPC1Q9H1A4 1944 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 PRRC2BQ5JSZ5 2229 aaKnown RBP14.92□□□□□ -0.02
RNF4-208ENST00000507247 LINC01565O15544 149 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 RFPL2O75678 378 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 ZMYND10O75800 440 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 GJB6O95452 261 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 GLP2RO95838 553 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 USP17L7P0C7H9 530 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 TMEM253P0C7T8 217 aa14.92□□□□□ -0.02
RNF4-208ENST00000507247 HMGA1P17096 107 aaKnown RBP14.92□□□□□ -0.02
RNF4-208ENST00000507247 POU3F3P20264 500 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms