RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 RTN3O95197 1032 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-210ENST00000506767 F11P03951 625 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 MMEP08473 750 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 CCDC172P0C7W6 258 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 HNRNPH3P31942 346 aaKnown RBP13.56□□□□□ -0.24
TCOF1-210ENST00000506767 CDH5P33151 784 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-210ENST00000506767 KRT9P35527 623 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 CCR2P41597 374 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 KIF11P52732 1056 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 SLC5A3P53794 718 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 SLC8A3P57103 927 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 FMO1Q01740 532 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 CDR2Q01850 454 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 CBX2Q14781 532 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-210ENST00000506767 SMAD2Q15796 467 aaKnown RBP13.56□□□□□ -0.24
TCOF1-210ENST00000506767 SLC5A9Q2M3M2 681 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 PABPC1LQ4VXU2 614 aaKnown RBP13.56□□□□□ -0.24
TCOF1-210ENST00000506767 PMF1Q6P1K2 205 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 GAREM2Q75VX8 874 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 TMC6Q7Z403 805 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 TMEM150AQ86TG1 271 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 GPIHBP1Q8IV16 184 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 ZNF397Q8NF99 534 aaPredicted RBP13.56□□□□□ -0.24
TCOF1-210ENST00000506767 SCAMP5Q8TAC9 235 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 OLIG1Q8TAK6 271 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 STK32AQ8WU08 396 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 SLC20A1Q8WUM9 679 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 SYT11Q9BT88 431 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 POMKQ9H5K3 350 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 ASAH2Q9NR71 780 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 EHD2Q9NZN4 543 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 CYTH4Q9UIA0 394 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 USP3Q9Y6I4 520 aa13.56□□□□□ -0.24
TCOF1-210ENST00000506767 OBSL1O75147 1896 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 DENND4CQ5VZ89 1909 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 GOLGA6L3A6NEY3 463 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 NRG2O14511 850 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-210ENST00000506767 ADCY5O95622 1261 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 FGF19O95750 216 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 CYP1A1P04798 512 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-210ENST00000506767 CDC25BP30305 580 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 ARID5AQ03989 594 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 TAF12Q16514 161 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 ASIC2Q16515 512 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 TJAP1Q5JTD0 557 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 CYP4A22Q5TCH4 519 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 TAF3Q5VWG9 929 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 HGSNATQ68CP4 663 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 PTCRAQ6ISU1 281 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-210ENST00000506767 PDZD4Q76G19 769 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-210ENST00000506767 SCML4Q8N228 414 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 ATXN2LQ8WWM7 1075 aaKnown RBP13.55□□□□□ -0.24
TCOF1-210ENST00000506767 HSFY1Q96LI6 401 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 DNAJC7Q99615 494 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 AGPAT1Q99943 283 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 SLC4A5Q9BY07 1137 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 FBXO44Q9H4M3 255 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 GRPEL1Q9HAV7 217 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 CYLDQ9NQC7 956 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 UXTQ9UBK9 157 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-210ENST00000506767 MAGED2Q9UNF1 606 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-210ENST00000506767 CLUHO75153 1309 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 BRWD1Q9NSI6 2320 aa13.55□□□□□ -0.24
TCOF1-210ENST00000506767 ZNF197O14709 1029 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 MFAP3LO75121 409 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 TADA3O75528 432 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 LSM8O95777 96 aaKnown RBP13.54□□□□□ -0.24
TCOF1-210ENST00000506767 MYL4P12829 197 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 YWHAQP27348 245 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 AAK1Q2M2I8 961 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 PM20D1Q6GTS8 502 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 POTEHQ6S545 545 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 TMEM110Q86TL2 294 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 PASD1Q8IV76 773 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 DRC7Q8IY82 874 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 OR8K1Q8NGG5 319 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 ITFG1Q8TB96 612 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 SHKBP1Q8TBC3 707 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 OVCA2Q8WZ82 227 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 TCEAL4Q96EI5 215 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 PCDHB18PQ96TA0 734 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 HAUS4Q9H6D7 363 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 SCML2Q9UQR0 700 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 NCANO14594 1321 aa13.54□□□□□ -0.24
TCOF1-210ENST00000506767 TPM1P09493 284 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 ZDHHC11BP0C7U3 371 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 SKILP12757 684 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 UNGP13051 313 aaPredicted RBP13.53□□□□□ -0.24
TCOF1-210ENST00000506767 IL9P15248 144 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 FSHRP23945 695 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 GABRR2P28476 465 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 CDC25CP30307 473 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 ACADSBP45954 432 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 PPP3CCP48454 512 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 RGS7P49802 495 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 KCNQ1P51787 676 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 TKTL1P51854 596 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 ADKP55263 362 aaKnown RBP13.53□□□□□ -0.24
TCOF1-210ENST00000506767 NOMO3P69849 1222 aa13.53□□□□□ -0.24
TCOF1-210ENST00000506767 MRPS5P82675 430 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms