RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 GLOD4Q9HC38 313 aa3.51□□□□□ -1.85
GYPB-207ENST00000506679 GBA2Q9HCG7 927 aaPredicted RBP3.51□□□□□ -1.85
GYPB-207ENST00000506679 TRMT13Q9NUP7 481 aaKnown RBP3.51□□□□□ -1.85
GYPB-207ENST00000506679 FNIP2Q9P278 1114 aa3.51□□□□□ -1.85
GYPB-207ENST00000506679 ZNF212Q9UDV6 495 aa3.51□□□□□ -1.85
GYPB-207ENST00000506679 ITGB1BP2Q9UKP3 347 aa3.51□□□□□ -1.85
GYPB-207ENST00000506679 HDAC9Q9UKV0 1011 aa3.51□□□□□ -1.85
GYPB-207ENST00000506679 ARHGEF17Q96PE2 2063 aaPredicted RBP3.51□□□□□ -1.85
GYPB-207ENST00000506679 GCOM1H8Y6P7 765 aaPredicted RBP3.5□□□□□ -1.85
GYPB-207ENST00000506679 RAB27BO00194 218 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 APOL1O14791 398 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 NCK2O43639 380 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 ORC4O43929 436 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 PLIN1O60240 522 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 SRGAP2O75044 1071 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 PIAS2O75928 621 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 C1QL1O75973 258 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 FESP07332 822 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 NR2F6P10588 404 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 TPH1P17752 444 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 DRD4P21917 467 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 UQCRC1P31930 480 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 HTR3AP46098 478 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 PMS2P11Q13670 270 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 LY6KQ17RY6 165 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 PLAC9Q5JTB6 97 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 TREML2Q5T2D2 321 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 DEPDC1Q5TB30 811 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 CACHD1Q5VU97 1274 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 IZUMO3Q5VZ72 239 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 SLC9A4Q6AI14 798 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 ANKRD16Q6P6B7 361 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 RNF44Q7L0R7 432 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 BEND5Q7L4P6 421 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 WDR53Q7Z5U6 358 aaPredicted RBP3.5□□□□□ -1.85
GYPB-207ENST00000506679 GRASPQ7Z6J2 395 aaPredicted RBP3.5□□□□□ -1.85
GYPB-207ENST00000506679 PRIMA1Q86XR5 153 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 SPARTQ8N0X7 666 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 FANCBQ8NB91 859 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 RP9Q8TA86 221 aaKnown RBP3.5□□□□□ -1.85
GYPB-207ENST00000506679 CAGE1Q8TC20 777 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 ZDHHC12Q96GR4 267 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 ZNF668Q96K58 619 aaPredicted RBP3.5□□□□□ -1.85
GYPB-207ENST00000506679 UROC1Q96N76 676 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 MYD88Q99836 296 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 C17orf80Q9BSJ5 609 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 VN1R3Q9BXE9 311 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 AS3MTQ9HBK9 375 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 ARHGEF3Q9NR81 526 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 SLC52A1Q9NWF4 448 aa3.5□□□□□ -1.85
GYPB-207ENST00000506679 COL11A2P13942 1736 aaPredicted RBP3.5□□□□□ -1.85
GYPB-207ENST00000506679 H0YIZ8 118 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 AGPSO00116 658 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 ZNF213O14771 459 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 KIAA0355O15063 1070 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 RASAL1O95294 804 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 TTLL1O95922 423 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 MYL4P12829 197 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 GABRB3P28472 473 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 CTGFP29279 349 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 EPHA3P29320 983 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 COPAP53621 1224 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 SOX10P56693 466 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 TIRAPP58753 221 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 KCNAB1Q14722 419 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 CYP1B1Q16678 543 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 SLC35G1Q2M3R5 365 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 ERCC6LQ2NKX8 1250 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 FAM209BQ5JX69 171 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 DGKKQ5KSL6 1271 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 SYCP2LQ5T4T6 812 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 MANEALQ5VSG8 457 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 MZT2AQ6P582 158 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 KIAA0408Q6ZU52 694 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 TOGARAM2Q6ZUX3 1019 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 Q6ZWC4 215 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 CCDC33Q8N5R6 958 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 CYP2W1Q8TAV3 490 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 DEPTORQ8TB45 409 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 SMCR8Q8TEV9 937 aaPredicted RBP3.49□□□□□ -1.85
GYPB-207ENST00000506679 R3HDM4Q96D70 268 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 FAM227BQ96M60 508 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 CCDC138Q96M89 665 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 ELAC2Q9BQ52 826 aaKnown RBP3.49□□□□□ -1.85
GYPB-207ENST00000506679 THAP7Q9BT49 309 aaPredicted RBP3.49□□□□□ -1.85
GYPB-207ENST00000506679 DUSP26Q9BV47 211 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 FSD1LQ9BXM9 530 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 NLRC4Q9NPP4 1024 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 TRIM36Q9NQ86 728 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 DUSP22Q9NRW4 184 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 SEMA4GQ9NTN9 838 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 GJB4Q9NTQ9 266 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 TBC1D23Q9NUY8 699 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 DLL3Q9NYJ7 618 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 SLC17A6Q9P2U8 582 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 TLK1Q9UKI8 766 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 ADAM21Q9UKJ8 722 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 RIMKLBQ9ULI2 386 aa3.49□□□□□ -1.85
GYPB-207ENST00000506679 DRG1Q9Y295 367 aaKnown RBP3.49□□□□□ -1.85
GYPB-207ENST00000506679 FNDC1Q4ZHG4 1894 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms