RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 RHOT2Q8IXI1 618 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 NRSN1Q8IZ57 195 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 SPARTQ8N0X7 666 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 ANKRD35Q8N283 1001 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 SLC30A5Q8TAD4 765 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 SDCCAG3Q96C92 435 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 GRAMD1AQ96CP6 724 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZNF668Q96K58 619 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 SEC62Q99442 399 aaKnown RBP3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 RTKNQ9BST9 563 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 PTDSS2Q9BVG9 487 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZCWPW1Q9H0M4 648 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 SLC25A32Q9H2D1 315 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 PABPC3Q9H361 631 aaKnown RBP3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 UNC45AQ9H3U1 944 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 RNPEPQ9H4A4 650 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 MLXIPQ9HAP2 919 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 SEPSECSQ9HD40 501 aaKnown RBP3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 IFT80Q9P2H3 777 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 SLC13A4Q9UKG4 626 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 ATP10BO94823 1461 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 NUP153P49790 1475 aaKnown RBP3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 FRMPD1Q5SYB0 1578 aa3.71□□□□□ -1.82
TRAPPC11-205ENST00000506426 B9A039 149 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 LAMTOR5O43504 91 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 SRGAP2O75044 1071 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 RHOBTB3O94955 611 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 VIPP01282 170 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 POLBP06746 335 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 ANXA6P08133 673 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 CKMT1AP12532 417 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 GYS1P13807 737 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 KCNA2P16389 499 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 XBP1P17861 261 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 ITGALP20701 1170 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 KCNA3P22001 575 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 BDNFP23560 247 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 CNTFP26441 200 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 MST1P26927 711 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 PRKAR1BP31321 381 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 AARSP49588 968 aaKnown RBP eCLIP3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZNF134P52741 427 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 BCAT1P54687 386 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 NHLH2Q02577 135 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 HHEXQ03014 270 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 FOXL1Q12952 345 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 MYO1EQ12965 1108 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 GPS1Q13098 491 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 ATP1A4Q13733 1029 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 E2F2Q14209 437 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 ZIK1Q3SY52 487 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 HYIQ5T013 277 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 MANEALQ5VSG8 457 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 AGAP9Q5VTM2 703 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 TMEM108Q6UXF1 575 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 LRRTM4Q86VH4 590 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 C2CD5Q86YS7 1000 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 SYT12Q8IV01 421 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 OR6Y1Q8NGX8 325 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 ABHD5Q8WTS1 349 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 AFG1LQ8WV93 481 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 WDR60Q8WVS4 1066 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 MIEF2Q96C03 454 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 LRIG1Q96JA1 1093 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 GNRHR2Q96P88 292 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 DDX23Q9BUQ8 820 aaKnown RBP3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 SLC26A6Q9BXS9 759 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 TRIM5Q9C035 493 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 TMX4Q9H1E5 349 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 TAF1DQ9H5J8 278 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 EPS8L2Q9H6S3 715 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 WASH6PQ9NQA3 447 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 PRDM8Q9NQV8 689 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 CTTNBP2NLQ9P2B4 639 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 DNAJB11Q9UBS4 358 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 TMEM98Q9Y2Y6 226 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 SCINQ9Y6U3 715 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 SAMD9Q5K651 1589 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 CFAP43Q8NDM7 1665 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 MADDQ8WXG6 1647 aa3.7□□□□□ -1.82
TRAPPC11-205ENST00000506426 SETD1BQ9UPS6 1966 aaKnown RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 PTPRMP28827 1452 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 A0A1B0GTW7 788 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 NPEPPSL1A6NEC2 478 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 OR2W5A6NFC9 320 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 GOLGA6L6A8MZA4 724 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 DIRC3C9JPN6 131 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 hCG_1984214I3L0E3 225 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 TOR1BO14657 336 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 CD3EAPO15446 510 aaKnown RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 SNX2O60749 519 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 ERN1O75460 977 aaKnown RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 RAD17O75943 681 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 SUN1O94901 812 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 GPANK1O95872 356 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 ELF1P32519 619 aa3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 ANXA11P50995 505 aaKnown RBP3.69□□□□□ -1.82
TRAPPC11-205ENST00000506426 PNLIPRP1P54315 467 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms