RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 HERVK_113Q902F9 699 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 TTC17Q96AE7 1141 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 SH3KBP1Q96B97 665 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 WDR24Q96S15 920 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 SYT3Q9BQG1 590 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 AIFM2Q9BRQ8 373 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 GPATCH1Q9BRR8 931 aaKnown RBP2.4□□□□□ -2.03
NEDD4-205ENST00000506154 NTPCRQ9BSD7 190 aaKnown RBP2.4□□□□□ -2.03
NEDD4-205ENST00000506154 SPATA9Q9BWV2 254 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 CDADC1Q9BWV3 514 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 SUGCTQ9HAC7 445 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 RRAGCQ9HB90 399 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 SEC31BQ9NQW1 1179 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 ARHGEF4Q9NR80 690 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 REV1Q9UBZ9 1251 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 GTF2IRD1Q9UHL9 959 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHA12Q9UN75 941 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 SIT1Q9Y3P8 196 aa2.4□□□□□ -2.03
NEDD4-205ENST00000506154 A0A0A6YYJ9 748 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 IQANK1A0A1B0GTG1 560 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 FAM221AA4D161 298 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 MIF4GDA9UHW6 222 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 SLCO1B7G3V0H7 640 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 H7C1D1 291 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 EBAG9O00559 213 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TRAPPC3O43617 180 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 GREM1O60565 184 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 SNX2O60749 519 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PEX11AO75192 247 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TBCAO75347 108 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 DAB1O75553 588 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 STAMBPO95630 424 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CHRNB1P11230 501 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 NCAM1P13591 858 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TRHRP34981 398 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 SERPINB6P35237 376 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 MTHFRP42898 656 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CTSWP56202 376 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 GIT2Q14161 759 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 KCNT1Q5JUK3 1230 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 WDR45BQ5MNZ6 344 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 GRTP1Q5TC63 336 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 LLGL2Q6P1M3 1020 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 B4GALNT4Q76KP1 1039 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 APTXQ7Z2E3 356 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CAND1Q86VP6 1230 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 MB21D2Q8IYB1 491 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TRMT44Q8IYL2 757 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 EIF1ADQ8N9N8 165 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ZUFSPQ96AP4 578 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PRPF18Q99633 342 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 APBA2Q99767 749 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 MYD88Q99836 296 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CLSTN2Q9H4D0 955 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 INTS13Q9NVM9 706 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 AATFQ9NY61 560 aaKnown RBP eCLIP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 MIS18AQ9NYP9 233 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PTTG2Q9NZH5 202 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 MKL2Q9ULH7 1088 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 AGAP1Q9UPQ3 857 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHB12Q9Y5F1 795 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PCDHA2Q9Y5H9 948 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 UTRNP46939 3433 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CYP2D7A0A087X1C5 515 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CCDC163A0A0D9SF12 145 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 SH3PXD2BA1X283 911 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PTPDC1A2A3K4 754 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CCNT1O60563 726 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 MAFO75444 373 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 OXSR1O95747 527 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 RARBP10826 455 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ICAM2P13598 275 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 CXCR2P25025 360 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 GABRB3P28472 473 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PRKAR1BP31321 381 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 HCAR3P49019 387 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 GUCY1A3Q02108 690 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 IL10RAQ13651 578 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF568Q3ZCX4 644 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 KIAA0319Q5VV43 1072 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 BTN2A1Q7KYR7 527 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 COPS6Q7L5N1 327 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 TRIML1Q8N9V2 468 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 REPS2Q8NFH8 660 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 AFAP1L1Q8TED9 768 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ZNF473Q8WTR7 871 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 GTPBP3Q969Y2 492 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 SKA1Q96BD8 255 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 RBM18Q96H35 190 aaKnown RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 NSMCE3Q96MG7 304 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 MED15Q96RN5 788 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 UQCC2Q9BRT2 126 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PRDM12Q9H4Q4 367 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 USP29Q9HBJ7 922 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 ZSWIM6Q9HCJ5 1215 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 JPH1Q9HDC5 661 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 FBXL7Q9UJT9 491 aa2.39□□□□□ -2.03
NEDD4-205ENST00000506154 PNMA8BQ9ULN7 279 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-205ENST00000506154 VPS4AQ9UN37 437 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms