RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 KRT35Q92764 455 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 MS4A14Q96JA4 679 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 LPIN3Q9BQK8 851 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 RTP3Q9BQQ7 232 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 TTPALQ9BTX7 342 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 HTATIP2Q9BUP3 242 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 ZCWPW1Q9H0M4 648 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 MTIF3Q9H2K0 278 aaKnown RBP12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 CSNK1G1Q9HCP0 422 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 HOMER3Q9NSC5 361 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 RRN3Q9NYV6 651 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 TJP2Q9UDY2 1190 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 TMEM59LQ9UK28 342 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 STAP1Q9ULZ2 295 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 PCDHB5Q9Y5E4 795 aa12.62□□□□□ -0.39
POLR2J3-211ENST00000506060 TARSL2A2RTX5 802 aaKnown RBP12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 F8VP50 259 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 TRIM66O15016 1216 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 PRPSAP2O60256 369 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 BDNFP23560 247 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 PPM1AP35813 382 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 MAGEA11P43364 429 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 TKTL1P51854 596 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 MRPS5P82675 430 aaKnown RBP12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 ADIGQ0VDE8 80 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 BTG3Q14201 252 aaPredicted RBP12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 ELF2Q15723 593 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 USP41Q3LFD5 358 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 KIAA1841Q6NSI8 718 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 C8orf74Q6P047 294 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 PSRC1Q6PGN9 363 aaPredicted RBP12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 UBE2Q1Q7Z7E8 422 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 SCML4Q8N228 414 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 OR10T2Q8NGX3 314 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 CCDC26Q8TAB7 109 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 JOSD2Q8TAC2 188 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 FAM149B1Q96BN6 582 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 TMEM169Q96HH4 297 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 YME1L1Q96TA2 773 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 PKMYT1Q99640 499 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 SMOQ99835 787 aa12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 V9GYY5 206 aaPredicted RBP12.61□□□□□ -0.39
POLR2J3-211ENST00000506060 ZBBXA8MT70 800 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 F8W810 466 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 PIK3R2O00459 728 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 ERLIN1O75477 346 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 DAB1O75553 588 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 KRT1P04264 644 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 PYGMP11217 842 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 CPB1P15086 417 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 EN2P19622 333 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 GJC1P36383 396 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 GRIK1P39086 918 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 YWHAZP63104 245 aaKnown RBP12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 C2orf54Q08AI8 447 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 ZNF211Q13398 564 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 MRPL58Q14197 206 aaKnown RBP12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 SLC39A12Q504Y0 691 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 BOLA3Q53S33 107 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 RAB41Q5JT25 222 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 DCAF12L1Q5VU92 463 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 KCNT2Q6UVM3 1135 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 MAATS1Q7Z4T9 603 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 SLC13A5Q86YT5 568 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 MAP7D3Q8IWC1 876 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 EMC1Q8N766 993 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 LRRN4CLQ8ND94 238 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 SPPL2BQ8TCT7 592 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 ZNF689Q96CS4 500 aaPredicted RBP12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 TBCBQ99426 244 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 DDX23Q9BUQ8 820 aaKnown RBP12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 SLITRK6Q9H5Y7 841 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 CWH43Q9H720 699 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 RBM12Q9NTZ6 932 aaKnown RBP12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 MARCH5Q9NX47 278 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 SPG21Q9NZD8 308 aa12.6□□□□□ -0.39
POLR2J3-211ENST00000506060 CAPN9O14815 690 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 FSCN2O14926 492 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 LRCH4O75427 683 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 GRAP2O75791 330 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 ZBED1O96006 694 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 RHOXF2BP0C7M4 288 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 NOS2P35228 1153 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 PTPN7P35236 360 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 MATKP42679 507 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 MARCKSL1P49006 195 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 TAS2R40P59535 323 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 OGDHQ02218 1023 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 CREMQ03060 361 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 ZNF252P-AS1Q0IIN9 211 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 STRADAQ7RTN6 431 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 NOA1Q8NC60 698 aaKnown RBP12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 TEKT4Q8WW24 435 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 IGSF21Q96ID5 467 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 C8orf48Q96LL4 319 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 RHOXF2Q9BQY4 288 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 ZBED2Q9BTP6 218 aa12.59□□□□□ -0.39
POLR2J3-211ENST00000506060 GPR62Q9BZJ7 368 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms