RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 IFRD2Q12894 506 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-222ENST00000506018 USP4Q13107 963 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 CCINQ13939 588 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 ZNF77Q15935 545 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 CCDC142Q17RM4 750 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 ZACNQ401N2 412 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 FBXO43Q4G163 708 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 TRIM68Q6AZZ1 485 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 TXNDC11Q6PKC3 985 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 SCARA5Q6ZMJ2 495 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 UNC93AQ86WB7 457 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 KIAA1958Q8N8K9 716 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 SUMF1Q8NBK3 374 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 SH3RF2Q8TEC5 729 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 OVCA2Q8WZ82 227 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 CYP2S1Q96SQ9 504 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 GTPBP4Q9BZE4 634 aaKnown RBP11.07□□□□□ -0.64
NR1I3-222ENST00000506018 DPEP3Q9H4B8 488 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 SMYD3Q9H7B4 428 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 ECT2Q9H8V3 914 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 DMAP1Q9NPF5 467 aaPredicted RBP11.07□□□□□ -0.64
NR1I3-222ENST00000506018 HPS4Q9NQG7 708 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 RBM12Q9NTZ6 932 aaKnown RBP11.07□□□□□ -0.64
NR1I3-222ENST00000506018 COMMD8Q9NX08 183 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 SMG5Q9UPR3 1016 aaKnown RBP11.07□□□□□ -0.64
NR1I3-222ENST00000506018 OTOGLQ3ZCN5 2332 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 SPAG17Q6Q759 2223 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 SPTBN4Q9H254 2564 aa11.07□□□□□ -0.64
NR1I3-222ENST00000506018 C2orf78A6NCI8 922 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 STX10O60499 249 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 SMC2O95347 1197 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 SDHBP21912 280 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 ID4P47928 161 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 FOXK2Q01167 660 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 SATB1Q01826 763 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 TAF10Q12962 218 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 ADAM9Q13443 819 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 NFKBIBQ15653 356 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 TMEM196Q5HYL7 178 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 SV2AQ7L0J3 742 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 LONP2Q86WA8 852 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 FAM186BQ8IYM0 893 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 KIAA2013Q8IYS2 634 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 PLEKHO2Q8TD55 490 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 FBXO32Q969P5 355 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 TSG101Q99816 390 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 P2RY13Q9BPV8 354 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 B3GNT5Q9BYG0 378 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 ZNF518BQ9C0D4 1074 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 GZF1Q9H116 711 aaPredicted RBP11.06□□□□□ -0.64
NR1I3-222ENST00000506018 GDPD2Q9HCC8 539 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 GCNT4Q9P109 453 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 SLC8A2Q9UPR5 921 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 MAPK8IP1Q9UQF2 711 aa11.06□□□□□ -0.64
NR1I3-222ENST00000506018 ZNF840PA6NDX5 716 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 CETN3O15182 167 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 AP1G2O75843 785 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 VNN1O95497 513 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 ASS1P00966 412 aaKnown RBP11.05□□□□□ -0.64
NR1I3-222ENST00000506018 HLA-DRAP01903 254 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 EPB41P11171 864 aaKnown RBP11.05□□□□□ -0.64
NR1I3-222ENST00000506018 MBL2P11226 248 aaPredicted RBP11.05□□□□□ -0.64
NR1I3-222ENST00000506018 ARSAP15289 507 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 GJA4P35212 333 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 RAP1GAPP47736 663 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 CDH8P55286 799 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 USP46P62068 366 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 DLG4P78352 724 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 SLC7A9P82251 487 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 EDRF1Q3B7T1 1238 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 PRR23BQ6ZRT6 265 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 Q6ZS52 159 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 ACOT1Q86TX2 421 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 FAM35AQ86V20 835 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 TTC39CQ8N584 583 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 CD101Q93033 1021 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 NACA2Q9H009 215 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 FBXO44Q9H4M3 255 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 CYP3A43Q9HB55 503 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 KRT82Q9NSB4 513 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 WNT6Q9Y6F9 365 aa11.05□□□□□ -0.64
NR1I3-222ENST00000506018 LEFTY2O00292 366 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 CLDN5O00501 218 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 FAM200BP0CF97 657 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 TDGF1P13385 188 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 HOXA6P31267 233 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 GTF2H1P32780 548 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 NDST1P52848 882 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 STIM1Q13586 685 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 SIM2Q14190 667 aaPredicted RBP11.04□□□□□ -0.64
NR1I3-222ENST00000506018 EML3Q32P44 896 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 KRT39Q6A163 491 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 LAIR1Q6GTX8 287 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 CEP68Q76N32 757 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 CRYBG2Q8N1P7 616 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 ACDQ96AP0 544 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 CHAMP1Q96JM3 812 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 GSDMAQ96QA5 445 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 SLC22A12Q96S37 553 aa11.04□□□□□ -0.64
NR1I3-222ENST00000506018 ANP32EQ9BTT0 268 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms