RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 SPAG9O60271 1321 aaKnown RBP6.85□□□□□ -1.31
NIPBL-205ENST00000505998 F8W8V4 182 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 KPNA5O15131 536 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 IL18RAPO95256 599 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 GCP02774 474 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 CHRM2P08172 466 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 MPLP40238 635 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 INHBCP55103 352 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 FOXI1Q12951 378 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 MYO1EQ12965 1108 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 DAG1Q14118 895 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 INSCQ1MX18 579 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 LCE5AQ5TCM9 118 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 RGS7BPQ6MZT1 257 aaPredicted RBP6.85□□□□□ -1.31
NIPBL-205ENST00000505998 ZDHHC24Q6UX98 284 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 LDLRAD3Q86YD5 345 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 AFAP1Q8N556 730 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 IPCEF1Q8WWN9 437 aaPredicted RBP6.85□□□□□ -1.31
NIPBL-205ENST00000505998 BRIP1Q9BX63 1249 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 KRTAP4-7Q9BYR0 210 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 TOR3AQ9H497 397 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 PACSIN3Q9UKS6 424 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 TBC1D30Q9Y2I9 924 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 CAMSAP1Q5T5Y3 1602 aa6.85□□□□□ -1.31
NIPBL-205ENST00000505998 ANKRD50Q9ULJ7 1429 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 LOC102723971A0A1B0GUV8 181 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 CCDC194A0A1B0GVG4 234 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 PPM1DO15297 605 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 MPPED1O15442 326 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 RHOBTB3O94955 611 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 PARP1P09874 1014 aaKnown RBP6.84□□□□□ -1.31
NIPBL-205ENST00000505998 CARSP49589 748 aaKnown RBP6.84□□□□□ -1.31
NIPBL-205ENST00000505998 PRIM2P49643 509 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 NEK3P51956 506 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 DGKEP52429 567 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 PRKAG1P54619 331 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 MRPS35P82673 323 aaKnown RBP6.84□□□□□ -1.31
NIPBL-205ENST00000505998 DPTQ07507 201 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 PTPRRQ15256 657 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 NBPF8Q3BBV2 869 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 ZIK1Q3SY52 487 aaPredicted RBP6.84□□□□□ -1.31
NIPBL-205ENST00000505998 UNC13DQ70J99 1090 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 SLC15A3Q8IY34 581 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 YAF2Q8IY57 180 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 SLC9A6Q92581 669 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 FKBP10Q96AY3 582 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 SNX22Q96L94 193 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 CHST8Q9H2A9 424 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 SERHLQ9NQF3 203 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 XPNPEP3Q9NQH7 507 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 KLC4Q9NSK0 619 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 ABCC3O15438 1527 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 EFCAB6Q5THR3 1501 aa6.84□□□□□ -1.31
NIPBL-205ENST00000505998 KDM5AP29375 1690 aaKnown RBP6.84□□□□□ -1.32
NIPBL-205ENST00000505998 POM121BA6NF01 834 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 AKAP8O43823 692 aaKnown RBP6.83□□□□□ -1.32
NIPBL-205ENST00000505998 RHOP08100 348 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 TXNP10599 105 aaKnown RBP6.83□□□□□ -1.32
NIPBL-205ENST00000505998 ADRA1BP35368 520 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 CASP5P51878 434 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 ZNF543Q08ER8 600 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 EIF2B5Q13144 721 aaKnown RBP6.83□□□□□ -1.32
NIPBL-205ENST00000505998 SLC29A2Q14542 456 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 LONRF1Q17RB8 773 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 KAZNQ674X7 775 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 SDR16C5Q8N3Y7 309 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 CCDC33Q8N5R6 958 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 BPIFB1Q8TDL5 484 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 ACTRT2Q8TDY3 377 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 PARD3BQ8TEW8 1205 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 TFAP2BQ92481 460 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 PPP2R3CQ969Q6 453 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 CXorf36Q9H7Y0 433 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 MID2Q9UJV3 735 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 PHTF1Q9UMS5 762 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 SSX2IPQ9Y2D8 614 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 E9PCH4 1651 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 C3P01024 1663 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 ARHGAP31Q2M1Z3 1444 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 MADDQ8WXG6 1647 aa6.83□□□□□ -1.32
NIPBL-205ENST00000505998 ADGRA2Q96PE1 1338 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 CLTCQ00610 1675 aaKnown RBP6.82□□□□□ -1.32
NIPBL-205ENST00000505998 RPRD2Q5VT52 1461 aaKnown RBP6.82□□□□□ -1.32
NIPBL-205ENST00000505998 CCP110O43303 1012 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 MT-ND5P03915 603 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 SLPIP03973 132 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 ANXA2P07355 339 aaKnown RBP6.82□□□□□ -1.32
NIPBL-205ENST00000505998 PDHA1P08559 390 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 IL1R1P14778 569 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 KCNA3P22001 575 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 STT3AP46977 705 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 PDE6CP51160 858 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 TGFB2P61812 414 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 TBCCQ15814 346 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 TXNRD1Q16881 649 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 TEDDM1Q5T9Z0 273 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 CACHD1Q5VU97 1274 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 KIAA0895LQ68EN5 471 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 DTX2Q86UW9 622 aa6.82□□□□□ -1.32
NIPBL-205ENST00000505998 LIX1LQ8IVB5 337 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms