RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 AARSP49588 968 aaKnown RBP eCLIP7.6□□□□□ -1.19
VCAN-206ENST00000505615 SEC13P55735 322 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 AKAP17AQ02040 695 aaKnown RBP7.6□□□□□ -1.19
VCAN-206ENST00000505615 YWHAHQ04917 246 aaPredicted RBP7.6□□□□□ -1.19
VCAN-206ENST00000505615 GFPT1Q06210 699 aaPredicted RBP7.6□□□□□ -1.19
VCAN-206ENST00000505615 USP4Q13107 963 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 PSMD2Q13200 908 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 SLC14A1Q13336 389 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 ZNF268Q14587 947 aaPredicted RBP7.6□□□□□ -1.19
VCAN-206ENST00000505615 GAB4Q2WGN9 574 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 ATF7IP2Q5U623 682 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 PPP4R3AQ6IN85 833 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 CPA6Q8N4T0 437 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 CCDC33Q8N5R6 958 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 CEP76Q8TAP6 659 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 BAHD1Q8TBE0 780 aaPredicted RBP7.6□□□□□ -1.19
VCAN-206ENST00000505615 PIGOQ8TEQ8 1089 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 SPACA7Q96KW9 195 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 PSMG3-AS1Q96PY0 264 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 KIFC3Q9BVG8 833 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 KIF9Q9HAQ2 790 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 IGSF5Q9NSI5 407 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 SLC38A7Q9NVC3 462 aa7.6□□□□□ -1.19
VCAN-206ENST00000505615 APOBEC2Q9Y235 224 aaKnown RBP7.6□□□□□ -1.19
VCAN-206ENST00000505615 TIMM13Q9Y5L4 95 aaPredicted RBP7.6□□□□□ -1.19
VCAN-206ENST00000505615 TP53BP1Q12888 1972 aaPredicted RBP7.6□□□□□ -1.19
VCAN-206ENST00000505615 SPTBN1Q01082 2364 aaKnown RBP7.6□□□□□ -1.19
VCAN-206ENST00000505615 NBPF19A0A087WUL8 3843 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 ARID1BQ8NFD5 2236 aaPredicted RBP7.59□□□□□ -1.19
VCAN-206ENST00000505615 PIK3R2O00459 728 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 ARAFP10398 606 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 CPA1P15085 419 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 NMT1P30419 496 aaKnown RBP7.59□□□□□ -1.19
VCAN-206ENST00000505615 NAMPTP43490 491 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 OSTNP61366 133 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 CTBSQ01459 385 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 SRSF1Q07955 248 aaKnown RBP eCLIP7.59□□□□□ -1.19
VCAN-206ENST00000505615 MESP2Q0VG99 397 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 MYBPC2Q14324 1141 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 MTF1Q14872 753 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 ZNF77Q15935 545 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 EML3Q32P44 896 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 TSGA10IPQ3SY00 556 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 C2orf27AQ580R0 203 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 EFHC2Q5JST6 749 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 KRT25Q7Z3Z0 450 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 NEK8Q86SG6 692 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 ITIH5Q86UX2 942 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 SLC41A1Q8IVJ1 513 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 SFTPA1Q8IWL2 248 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 PGBD3Q8N328 593 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 MAB21L3Q8N8X9 362 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 MCPH1Q8NEM0 835 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 CCDC94Q9BW85 323 aaPredicted RBP7.59□□□□□ -1.19
VCAN-206ENST00000505615 CLMPQ9H6B4 373 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 PTPRHQ9HD43 1115 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 TOPORSQ9NS56 1045 aaPredicted RBP7.59□□□□□ -1.19
VCAN-206ENST00000505615 TDP1Q9NUW8 608 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 KIAA1522Q9P206 1035 aaPredicted RBP7.59□□□□□ -1.19
VCAN-206ENST00000505615 HSFX1Q9UBD0 423 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 TUBGCP4Q9UGJ1 667 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 ZMYM5Q9UJ78 669 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 PCOLCE2Q9UKZ9 415 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 WNT6Q9Y6F9 365 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 CREBBPQ92793 2442 aa7.59□□□□□ -1.19
VCAN-206ENST00000505615 ANKRD17O75179 2603 aaKnown RBP7.59□□□□□ -1.19
VCAN-206ENST00000505615 PYCARD-AS1I3L0S3 204 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 SGK1O00141 431 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 TADA3O75528 432 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 ALDH1A2O94788 518 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 HMGA1P17096 107 aaKnown RBP7.58□□□□□ -1.2
VCAN-206ENST00000505615 DDX6P26196 483 aaKnown RBP eCLIP7.58□□□□□ -1.2
VCAN-206ENST00000505615 MARCKSP29966 332 aaPredicted RBP7.58□□□□□ -1.2
VCAN-206ENST00000505615 AVPR1AP37288 418 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 YARSP54577 528 aaKnown RBP7.58□□□□□ -1.2
VCAN-206ENST00000505615 NLRP12P59046 1061 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 CFHR1Q03591 330 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 BFSP1Q12934 665 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 AAMPQ13685 434 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 EARS2Q5JPH6 523 aaKnown RBP7.58□□□□□ -1.2
VCAN-206ENST00000505615 LMBRD2Q68DH5 695 aaPredicted RBP7.58□□□□□ -1.2
VCAN-206ENST00000505615 TXNDC8Q6A555 127 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 CC2D1AQ6P1N0 951 aaPredicted RBP7.58□□□□□ -1.2
VCAN-206ENST00000505615 Q6ZUG5 572 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 RABEPKQ7Z6M1 372 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 TTC30AQ86WT1 665 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 ALLCQ8N6M5 410 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 IL17RCQ8NAC3 791 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 OR10T2Q8NGX3 314 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 DEPTORQ8TB45 409 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 RHBDD1Q8TEB9 315 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 OSCP1Q8WVF1 389 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 HMGB4Q8WW32 186 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 BRF1Q92994 677 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 EXOC4Q96A65 974 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 BTBD6Q96KE9 485 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 CCDC43Q96MW1 224 aaKnown RBP7.58□□□□□ -1.2
VCAN-206ENST00000505615 AIFM3Q96NN9 605 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 GCNAQ96QF7 691 aa7.58□□□□□ -1.2
VCAN-206ENST00000505615 AGXT2Q9BYV1 514 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms