RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 SDHAF4Q5VUM1 108 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 KIAA1211LQ6NV74 962 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 SLC39A4Q6P5W5 647 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 RAB44Q7Z6P3 723 aaPredicted RBP10.58□□□□□ -0.72
NEDD9-210ENST00000505589 FILIP1Q7Z7B0 1213 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 ADGRF2Q8IZF7 708 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 RGL4Q8IZJ4 473 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 SYCP3Q8IZU3 236 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 CHCHD4Q8N4Q1 142 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 MINDY1Q8N5J2 469 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 RIN3Q8TB24 985 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 HMGB4Q8WW32 186 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 RLN3Q8WXF3 142 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 ADAMTS14Q8WXS8 1223 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 OVCA2Q8WZ82 227 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 SLC22A12Q96S37 553 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 DUSP9Q99956 384 aaKnown RBP10.58□□□□□ -0.72
NEDD9-210ENST00000505589 MRPL44Q9H9J2 332 aaKnown RBP10.58□□□□□ -0.72
NEDD9-210ENST00000505589 DNAAF2Q9NVR5 837 aaKnown RBP10.58□□□□□ -0.72
NEDD9-210ENST00000505589 KIAA1522Q9P206 1035 aaPredicted RBP10.58□□□□□ -0.72
NEDD9-210ENST00000505589 DEC1Q9P2X7 70 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 L1RE1Q9UN81 338 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 STARD13Q9Y3M8 1113 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 WDFY3Q8IZQ1 3526 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 DENND4CQ5VZ89 1909 aa10.58□□□□□ -0.72
NEDD9-210ENST00000505589 SPAARA0A1B0GVQ0 90 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 TCRBV21S2A2A0A5A6 115 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 ZNF840PA6NDX5 716 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 SGK1O00141 431 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 RTN3O95197 1032 aaPredicted RBP10.57□□□□□ -0.72
NEDD9-210ENST00000505589 ABL1P00519 1130 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 TNNC2P02585 160 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 ADH5P11766 374 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 HOXB3P14651 431 aaPredicted RBP10.57□□□□□ -0.72
NEDD9-210ENST00000505589 GAP43P17677 238 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 ITPKAP23677 461 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 NTSR1P30989 418 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 ZNF132P52740 706 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 SUZ12Q15022 739 aaKnown RBP10.57□□□□□ -0.72
NEDD9-210ENST00000505589 DUOXA2Q1HG44 320 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 RHBDF2Q6PJF5 856 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 IL27RAQ6UWB1 636 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 CRELD2Q6UXH1 353 aaPredicted RBP10.57□□□□□ -0.72
NEDD9-210ENST00000505589 STXBP4Q6ZWJ1 553 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 ARMCX6Q7L4S7 300 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 BRSK2Q8IWQ3 736 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 TMEM130Q8N3G9 435 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 ZNF513Q8N8E2 541 aaPredicted RBP10.57□□□□□ -0.72
NEDD9-210ENST00000505589 MYCBPAPQ8TBZ2 947 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 RAD54LQ92698 747 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 C8orf48Q96LL4 319 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 XPO6Q96QU8 1125 aaKnown RBP10.57□□□□□ -0.72
NEDD9-210ENST00000505589 SYT15Q9BQS2 421 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 FAM213AQ9BRX8 229 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 TTLL2Q9BWV7 592 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 CAPN10Q9HC96 672 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 COMMD8Q9NX08 183 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 RBAKQ9NYW8 714 aaPredicted RBP10.57□□□□□ -0.72
NEDD9-210ENST00000505589 SH3BP1Q9Y3L3 701 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 NFE2L3Q9Y4A8 694 aa10.57□□□□□ -0.72
NEDD9-210ENST00000505589 CYP17A1P05093 508 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 MBL2P11226 248 aaPredicted RBP10.56□□□□□ -0.72
NEDD9-210ENST00000505589 PLCG1P19174 1290 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 TRIM21P19474 475 aaKnown RBP10.56□□□□□ -0.72
NEDD9-210ENST00000505589 BDNFP23560 247 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 ACAT1P24752 427 aaKnown RBP10.56□□□□□ -0.72
NEDD9-210ENST00000505589 KIR2DL1P43626 348 aaPredicted RBP10.56□□□□□ -0.72
NEDD9-210ENST00000505589 CDR1P51861 262 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 CYP27A1Q02318 531 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 ST3GAL1Q11201 340 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 SCAPQ12770 1279 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 MCM6Q14566 821 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 ZC2HC1CQ53FD0 456 aaPredicted RBP10.56□□□□□ -0.72
NEDD9-210ENST00000505589 NAIF1Q69YI7 327 aaPredicted RBP10.56□□□□□ -0.72
NEDD9-210ENST00000505589 PIP4P2Q8N4L2 257 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 C1orf127Q8N9H9 656 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 ENGASEQ8NFI3 743 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 ZNF419Q96HQ0 510 aaPredicted RBP10.56□□□□□ -0.72
NEDD9-210ENST00000505589 HPDLQ96IR7 371 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 FIZ1Q96SL8 496 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 PKMYT1Q99640 499 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 KIAA1586Q9HCI6 787 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 MBD1Q9UIS9 605 aaPredicted RBP10.56□□□□□ -0.72
NEDD9-210ENST00000505589 GPSM3Q9Y4H4 160 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 CPQQ9Y646 472 aa10.56□□□□□ -0.72
NEDD9-210ENST00000505589 FRYQ5TBA9 3013 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 SCN1AP35498 2009 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 TCHHQ07283 1943 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 ZNF233A6NK53 670 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 GFRA2O00451 464 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 NPC1O15118 1278 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 PRPF6O94906 941 aaKnown RBP10.55□□□□□ -0.72
NEDD9-210ENST00000505589 OLFM2O95897 454 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 HOXB2P14652 356 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 YWHAQP27348 245 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 ADSSP30520 456 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 GNL1P36915 607 aaPredicted RBP10.55□□□□□ -0.72
NEDD9-210ENST00000505589 TXLNAP40222 546 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 SLC6A11P48066 632 aa10.55□□□□□ -0.72
NEDD9-210ENST00000505589 GOLGA8FQ08AF8 430 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms