RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ARMCX6Q7L4S7 300 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 RAB44Q7Z6P3 723 aaPredicted RBP17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 MON1AQ86VX9 555 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 SCN4BQ8IWT1 228 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 TMEFF1Q8IYR6 380 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 OLIG1Q8TAK6 271 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 USP33Q8TEY7 942 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 OSCP1Q8WVF1 389 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 SPACA7Q96KW9 195 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 CUEDC2Q9H467 287 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 TRPC7Q9HCX4 862 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 TMEM74BQ9NUR3 256 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 GTF3C4Q9UKN8 822 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 MMP17Q9ULZ9 603 aa17.13■□□□□ 0.33
PDLIM7-213ENST00000505074 CUTAO60888 179 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 PPP6R2O75170 966 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 CLSTN1O94985 981 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 PCSK1P29120 753 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 P2RY2P41231 377 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 LHX1P48742 406 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 SEC13P55735 322 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 FAM160A1Q05DH4 1040 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 SURF1Q15526 300 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 CRY1Q16526 586 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 SCARA3Q6AZY7 606 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 OSTM1Q86WC4 334 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 CBWD2Q8IUF1 395 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 HSCBQ8IWL3 235 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 TOP6BLQ8N6T0 577 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 IQUBQ8NA54 791 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 RDH13Q8NBN7 331 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 LEO1Q8WVC0 666 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 HPDLQ96IR7 371 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 GTPBP2Q9BX10 602 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 TRIM9Q9C026 710 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 CCDC86Q9H6F5 360 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 INTS13Q9NVM9 706 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 GDAP2Q9NXN4 497 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 HSPBP1Q9NZL4 362 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 UXTQ9UBK9 157 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 MBD1Q9UIS9 605 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 SIX4Q9UIU6 781 aa17.12■□□□□ 0.33
PDLIM7-213ENST00000505074 HCRTO43612 131 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 OPHN1O60890 802 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 YEATS4O95619 227 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 CFIP05156 583 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 HMGA1P17096 107 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 PTGER3P43115 390 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 CYP2J2P51589 502 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 CCDC142Q17RM4 750 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 DUOXA2Q1HG44 320 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 SPDYCQ5MJ68 293 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 FAM26FQ5R3K3 315 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 LYSMD4Q5XG99 296 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 NELFCDQ8IXH7 590 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 CCDC33Q8N5R6 958 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 OR5B17Q8NGF7 314 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 RLN3Q8WXF3 142 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 MMS19Q96T76 1030 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 KBTBD4Q9NVX7 518 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 SLC6A14Q9UN76 642 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 WNT6Q9Y6F9 365 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 PTPRJQ12913 1337 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 HELZP42694 1942 aaKnown RBP17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 IGSF10Q6WRI0 2623 aa17.11■□□□□ 0.33
PDLIM7-213ENST00000505074 ANAPC1Q9H1A4 1944 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 PLXNB3Q9ULL4 1909 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 K7EQS6 105 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 EIF3DO15371 548 aaKnown RBP eCLIP17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 DLATP10515 647 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 TNNI1P19237 187 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 HOXD12P35452 270 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 PSMC1P62191 440 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 FAM193AP78312 1265 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 GFPT1Q06210 699 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 BYSLQ13895 437 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 ZNF77Q15935 545 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 E2F4Q16254 413 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 DUOXA1Q1HG43 343 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 SOWAHAQ2M3V2 549 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 EML3Q32P44 896 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 C4orf50Q6ZRC1 276 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 CEP76Q8TAP6 659 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 WHAMMQ8TF30 809 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 FNBP1Q96RU3 617 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 SYT15Q9BQS2 421 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 KIAA1586Q9HCI6 787 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 ABCB6Q9NP58 842 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 PILRBQ9UKJ0 227 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 ATXN2Q99700 1313 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 GON4LQ3T8J9 2241 aa17.1■□□□□ 0.33
PDLIM7-213ENST00000505074 CLIC2O15247 247 aa17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 POLR2DO15514 142 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 CKMP06732 381 aa17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 USP17L7P0C7H9 530 aa17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 ME1P48163 572 aa17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 MRPS21P82921 87 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 CYP27A1Q02318 531 aa17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 SNRNP35Q16560 246 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-213ENST00000505074 SHC4Q6S5L8 630 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms