RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 OR6B3Q8NGW1 331 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 IRX2Q9BZI1 471 aaPredicted RBP8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 CNGB3Q9NQW8 809 aa8.76□□□□□ -1.01
CDC42SE2-208ENST00000505065 TULP2O00295 520 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 ARNTLO00327 626 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 CLDN5O00501 218 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 RTN3O95197 1032 aaPredicted RBP8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 CYP1A2P05177 515 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 MMEP08473 750 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 BRD2P25440 801 aaKnown RBP8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 RPL10AP62906 217 aaKnown RBP8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 GOLGA7BQ2TAP0 167 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 PLEKHA7Q6IQ23 1121 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 XYLT1Q86Y38 959 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 RNF214Q8ND24 703 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 FAM71BQ8TC56 605 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 ACP6Q9NPH0 428 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 REXO2Q9Y3B8 237 aaKnown RBP8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 MBTPS2O43462 519 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 ERBB2P04626 1255 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 TPM3P06753 285 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 SLC7A9P82251 487 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 CCZ1BP86790 482 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 CCZ1P86791 482 aaPredicted RBP8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 C5orf22Q49AR2 442 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 TRNP1Q6NT89 227 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 GAREM2Q75VX8 874 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 C1orf131Q8NDD1 294 aaKnown RBP8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 OSER1Q9NX31 292 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 USTQ9Y2C2 406 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 COL6A3P12111 3177 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 TNRC6BQ9UPQ9 1833 aaKnown RBP8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 C8AP07357 584 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 FAM200BP0CF97 657 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 ACADSBP45954 432 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 GPR15P49685 360 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 MLLT6P55198 1093 aaPredicted RBP8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 DAOAP59103 153 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 PDE4CQ08493 712 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 USP4Q13107 963 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 PTPN20Q4JDL3 420 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 SFMBT2Q5VUG0 894 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 ACAD10Q6JQN1 1059 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 SLC26A9Q7LBE3 791 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 CCDC170Q8IYT3 715 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 NUP93Q8N1F7 819 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 NIPA2Q8N8Q9 360 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 OR8K1Q8NGG5 319 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 MMS19Q96T76 1030 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 TLE6Q9H808 572 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 MMRN2Q9H8L6 949 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 CERS4Q9HA82 394 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 KRT82Q9NSB4 513 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 FBXO21O94952 628 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 PGFP49763 221 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 DUSP4Q13115 394 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 GSE1Q14687 1217 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 SLC5A9Q2M3M2 681 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 Q6ZNB5 142 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 ATAD1Q8NBU5 361 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 CPXM1Q96SM3 734 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 KCNK16Q96T55 309 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 DNAI2Q9GZS0 605 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 UBE2ZQ9H832 354 aaPredicted RBP8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 PRKAG3Q9UGI9 489 aa8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 ZNF106Q9H2Y7 1883 aaKnown RBP8.75□□□□□ -1.01
CDC42SE2-208ENST00000505065 PDGFRBP09619 1106 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 CSH1P0DML2 217 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 CSH2P0DML3 217 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 SLC5A3P53794 718 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 RBM10P98175 930 aaKnown RBP8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 LRMPQ12912 555 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 SLC18A3Q16572 532 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 PDZD8Q8NEN9 1154 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 SHKBP1Q8TBC3 707 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 FNIP1Q8TF40 1166 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 AZIN2Q96A70 460 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 GAS2L1Q99501 681 aaPredicted RBP8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 HAUS4Q9H6D7 363 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 TRPV5Q9NQA5 729 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 NEU3Q9UQ49 428 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 CEP290O15078 2479 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 A0A0A6YYK5 440 aaPredicted RBP8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 AKR1B15C9JRZ8 316 aaPredicted RBP8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 PAPSS1O43252 624 aaPredicted RBP8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 KLRC2P26717 231 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 PSEN1P49768 467 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 TWF1Q12792 350 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 C10orf76Q5T2E6 689 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 CYP4V2Q6ZWL3 525 aaPredicted RBP8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 SPATA2LQ8IUW3 424 aaPredicted RBP8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 SLC39A13Q96H72 371 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 NECTIN4Q96NY8 510 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 ADAM33Q9BZ11 813 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 ZNF840PA6NDX5 716 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 CALCAP01258 141 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 BDNFP23560 247 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 PIGZQ86VD9 579 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 EHD2Q9NZN4 543 aa8.74□□□□□ -1.01
CDC42SE2-208ENST00000505065 EIF3CLB5ME19 914 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms