RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 TATDN2Q93075 761 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 PBXIP1Q96AQ6 731 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 NECAB3Q96P71 396 aaPredicted RBP10.41□□□□□ -0.74
NR1I3-220ENST00000505005 LPIN3Q9BQK8 851 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 ZNF518BQ9C0D4 1074 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 NACA2Q9H009 215 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 CRISPLD1Q9H336 500 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 LRRC4Q9HBW1 653 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 KRT82Q9NSB4 513 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 CLIC5Q9NZA1 410 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 SCML2Q9UQR0 700 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 ZNF510Q9Y2H8 683 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 DOCK8Q8NF50 2099 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 EYSQ5T1H1 3165 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 UNC80Q8N2C7 3258 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 TTC28Q96AY4 2481 aa10.41□□□□□ -0.74
NR1I3-220ENST00000505005 TMEM221A6NGB7 291 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 M0R296 226 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 XPO1O14980 1071 aaKnown RBP10.4□□□□□ -0.74
NR1I3-220ENST00000505005 CEBPBP17676 345 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 RAP1GAPP47736 663 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 SLC5A3P53794 718 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 SLC7A9P82251 487 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 COG7P83436 770 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 LRMPQ12912 555 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 PPP2R5DQ14738 602 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 SLC5A9Q2M3M2 681 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 ZNF394Q53GI3 561 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 FAM78AQ5JUQ0 283 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 PPP1R26Q5T8A7 1209 aaPredicted RBP10.4□□□□□ -0.74
NR1I3-220ENST00000505005 CDKAL1Q5VV42 579 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 ZNF852Q6ZMS4 543 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 CCDC186Q7Z3E2 898 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 ZNF677Q86XU0 584 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 HS6ST3Q8IZP7 471 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 SLC4A11Q8NBS3 891 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 KCTD13Q8WZ19 329 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 IRGQQ8WZA9 623 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 RNF25Q96BH1 459 aaPredicted RBP10.4□□□□□ -0.74
NR1I3-220ENST00000505005 SDCBP2Q9H190 292 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 DPEP3Q9H4B8 488 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 IL21Q9HBE4 155 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 CD320Q9NPF0 282 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 CNGB3Q9NQW8 809 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 LIMA1Q9UHB6 759 aaKnown RBP10.4□□□□□ -0.74
NR1I3-220ENST00000505005 ARHGAP26Q9UNA1 814 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 HCN4Q9Y3Q4 1203 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 REV3LO60673 3130 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 PTPRDP23468 1912 aa10.4□□□□□ -0.74
NR1I3-220ENST00000505005 ZNF638Q14966 1978 aaKnown RBP10.39□□□□□ -0.75
NR1I3-220ENST00000505005 NUP210Q8TEM1 1887 aaPredicted RBP10.39□□□□□ -0.75
NR1I3-220ENST00000505005 ZNF840PA6NDX5 716 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 HEPACAM2A8MVW5 462 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 STK25O00506 426 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 TNFRSF10BO14763 440 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 NFATC1O95644 943 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 KRT5P13647 590 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 SP100P23497 879 aaPredicted RBP10.39□□□□□ -0.75
NR1I3-220ENST00000505005 PON1P27169 355 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 ADORA2BP29275 332 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 KRT9P35527 623 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 ATP5C1P36542 298 aaKnown RBP10.39□□□□□ -0.75
NR1I3-220ENST00000505005 PLA2G4AP47712 749 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 MAP3K7CLP57077 242 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 ZNF445P59923 1031 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 TAF10Q12962 218 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 PARM1Q6UWI2 310 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 CLEC20AQ6ZU45 233 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 RALGPS2Q86X27 583 aaPredicted RBP10.39□□□□□ -0.75
NR1I3-220ENST00000505005 IRF2BP1Q8IU81 584 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 SIX6OS1Q8N1H7 587 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 SYNPOQ8N3V7 929 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 FBXL6Q8N531 539 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 TTC9BQ8N6N2 239 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 MAB21L3Q8N8X9 362 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 C12orf29Q8N999 325 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 RBBP8NLQ8NC74 664 aaPredicted RBP10.39□□□□□ -0.75
NR1I3-220ENST00000505005 WHAMMQ8TF30 809 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 ING5Q8WYH8 240 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 FGF14Q92915 247 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 ATP2A3Q93084 1043 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 TCEAL4Q96EI5 215 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 MED15Q96RN5 788 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 SLC46A2Q9BY10 475 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 STK33Q9BYT3 514 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 IRX2Q9BZI1 471 aaPredicted RBP10.39□□□□□ -0.75
NR1I3-220ENST00000505005 DCLK3Q9C098 648 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 PDCL3Q9H2J4 239 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.39□□□□□ -0.75
NR1I3-220ENST00000505005 FAM49BQ9NUQ9 324 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 FANCLQ9NW38 375 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 TMEM63CQ9P1W3 806 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 LSM7Q9UK45 103 aaKnown RBP10.39□□□□□ -0.75
NR1I3-220ENST00000505005 TSPAN16Q9UKR8 245 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 STRIP2Q9ULQ0 834 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 DENND4CQ5VZ89 1909 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 XIRP2A4UGR9 3374 aa10.39□□□□□ -0.75
NR1I3-220ENST00000505005 NOTCH4Q99466 2003 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 E2F8A0AVK6 867 aa10.38□□□□□ -0.75
NR1I3-220ENST00000505005 CLDN5O00501 218 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms