RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 SCAPQ12770 1279 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 TBCCQ15814 346 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 MPEG1Q2M385 716 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 KRTAP15-1Q3LI76 137 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 ABHD17BQ5VST6 288 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 PLAG1Q6DJT9 500 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 FCRL6Q6DN72 434 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 CRTC1Q6UUV9 634 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 ENAHQ8N8S7 591 aaPredicted RBP3.82□□□□□ -1.8
RFC1-209ENST00000504974 FANCBQ8NB91 859 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 OSCP1Q8WVF1 389 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 BRI3BPQ8WY22 251 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 ATG4AQ8WYN0 398 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 TFAP2BQ92481 460 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 FKBP10Q96AY3 582 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 ZBTB45Q96K62 511 aaPredicted RBP3.82□□□□□ -1.8
RFC1-209ENST00000504974 NELL2Q99435 816 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 COLEC11Q9BWP8 271 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.82□□□□□ -1.8
RFC1-209ENST00000504974 XPNPEP3Q9NQH7 507 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 KCTD5Q9NXV2 234 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 DNMT3BQ9UBC3 853 aaKnown RBP3.82□□□□□ -1.8
RFC1-209ENST00000504974 DKK2Q9UBU2 259 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 CCNL1Q9UK58 526 aaPredicted RBP3.82□□□□□ -1.8
RFC1-209ENST00000504974 HPSEQ9Y251 543 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 SSX2IPQ9Y2D8 614 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.82□□□□□ -1.8
RFC1-209ENST00000504974 HS3ST4Q9Y661 456 aa3.82□□□□□ -1.8
RFC1-209ENST00000504974 KIF13AQ9H1H9 1805 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 HECW2Q9P2P5 1572 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 CUX1P39880 1505 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 CLASP1Q7Z460 1538 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 POLA1P09884 1462 aaPredicted RBP3.81□□□□□ -1.8
RFC1-209ENST00000504974 PIPSLA2A3N6 862 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 AQP7P3A6NL99 342 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 A1BGP04217 495 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 ERBB2P04626 1255 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 CSF1RP07333 972 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 EGR2P11161 476 aaPredicted RBP3.81□□□□□ -1.8
RFC1-209ENST00000504974 IDEP14735 1019 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 ATICP31939 592 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 ZEB1P37275 1124 aaPredicted RBP3.81□□□□□ -1.8
RFC1-209ENST00000504974 MTHFSP49914 203 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 TNFAIP2Q03169 654 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 ELF2Q15723 593 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 NPY5RQ15761 445 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 LY6KQ17RY6 165 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 DGKKQ5KSL6 1271 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 CERCAMQ5T4B2 595 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 PCSK4Q6UW60 755 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 CATSPERGQ6ZRH7 1159 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 RHOUQ7L0Q8 258 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 SUPT20HQ8NEM7 779 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 XAGE5Q8WWM1 108 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 R3HDM4Q96D70 268 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 C18orf8Q96DM3 657 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 ZC3H10Q96K80 434 aaKnown RBP3.81□□□□□ -1.8
RFC1-209ENST00000504974 POLR3GLQ9BT43 218 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 GLOD4Q9HC38 313 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 TRMT13Q9NUP7 481 aaKnown RBP3.81□□□□□ -1.8
RFC1-209ENST00000504974 DMRT1Q9Y5R6 373 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 SNX14Q9Y5W7 946 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 TSPOAP1O95153 1857 aa3.81□□□□□ -1.8
RFC1-209ENST00000504974 TARBP1Q13395 1621 aaKnown RBP3.81□□□□□ -1.8
RFC1-209ENST00000504974 SNAPC4Q5SXM2 1469 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 SOGA1O94964 1423 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 A0A087WZ62 844 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 CLCA1A8K7I4 914 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 AREL1O15033 823 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 LMNAP02545 664 aaKnown RBP3.8□□□□□ -1.8
RFC1-209ENST00000504974 FESP07332 822 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 SRGNP10124 158 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 TGM1P22735 817 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 NTSR1P30989 418 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 IL6STP40189 918 aaPredicted RBP3.8□□□□□ -1.8
RFC1-209ENST00000504974 AVPR1BP47901 424 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 PGDP52209 483 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 PDE1AP54750 535 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 NXPH1P58417 271 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 CCNIQ14094 377 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 ZNF750Q32MQ0 723 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 GRAMD1BQ3KR37 738 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 TREML2Q5T2D2 321 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 VWA1Q6PCB0 445 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 Q6ZNX1 250 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 USP49Q70CQ1 688 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 ABRAQ8N0Z2 381 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 LNX2Q8N448 690 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 VGLL2Q8N8G2 317 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 ZNF527Q8NB42 609 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 GLIS1Q8NBF1 620 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 MORC4Q8TE76 937 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 IPO4Q8TEX9 1081 aaKnown RBP3.8□□□□□ -1.8
RFC1-209ENST00000504974 GLG1Q92896 1179 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 PGBD1Q96JS3 809 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 SNX27Q96L92 541 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 C17orf80Q9BSJ5 609 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 SELENOOQ9BVL4 669 aa3.8□□□□□ -1.8
RFC1-209ENST00000504974 WDR12Q9GZL7 423 aaKnown RBP3.8□□□□□ -1.8
RFC1-209ENST00000504974 PCDHAC1Q9H158 963 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms