RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 LRRTM3Q86VH5 581 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 LURAP1LQ8IV03 231 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 EFCAB13Q8IY85 973 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 DIS3L2Q8IYB7 885 aaKnown RBP6.48□□□□□ -1.37
GYPB-204ENST00000504951 DCP1BQ8IZD4 617 aaKnown RBP6.48□□□□□ -1.37
GYPB-204ENST00000504951 THEM5Q8N1Q8 247 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 TTC9BQ8N6N2 239 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 NSUN7Q8NE18 718 aaKnown RBP6.48□□□□□ -1.37
GYPB-204ENST00000504951 OR10T2Q8NGX3 314 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 PNKPQ96T60 521 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 LPIN3Q9BQK8 851 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 KIFC3Q9BVG8 833 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 TARS2Q9BW92 718 aaKnown RBP6.48□□□□□ -1.37
GYPB-204ENST00000504951 SMG9Q9H0W8 520 aaKnown RBP6.48□□□□□ -1.37
GYPB-204ENST00000504951 CD248Q9HCU0 757 aa6.48□□□□□ -1.37
GYPB-204ENST00000504951 TIMM13Q9Y5L4 95 aaPredicted RBP6.48□□□□□ -1.37
GYPB-204ENST00000504951 GOLGA4Q13439 2230 aaKnown RBP6.48□□□□□ -1.37
GYPB-204ENST00000504951 MYO18AQ92614 2054 aaKnown RBP6.47□□□□□ -1.37
GYPB-204ENST00000504951 TRAV19A0A0A6YYK7 116 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 IGHV1OR15-9A0A0B4J2B8 117 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 SGK1O00141 431 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 CLDN3O15551 220 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 FLRT2O43155 660 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 PAPSS1O43252 624 aaPredicted RBP6.47□□□□□ -1.37
GYPB-204ENST00000504951 FAM189A1O60320 539 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 TADA3O75528 432 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 SOAT2O75908 522 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 KAT7O95251 611 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 C1SP09871 688 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 LIG1P18858 919 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 MCM7P33993 719 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 EIF2S3P41091 472 aaKnown RBP6.47□□□□□ -1.37
GYPB-204ENST00000504951 ZNF132P52740 706 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 OSTNP61366 133 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 RPL10AP62906 217 aaKnown RBP6.47□□□□□ -1.37
GYPB-204ENST00000504951 SLC7A9P82251 487 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 SKOR1P84550 965 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 GUCY1B3Q02153 619 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 RPL6Q02878 288 aaKnown RBP6.47□□□□□ -1.37
GYPB-204ENST00000504951 CYP4F3Q08477 520 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 PSMD2Q13200 908 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 PDIA5Q14554 519 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 ECM1Q16610 540 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 PTPRNQ16849 979 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 MGAT5BQ3V5L5 792 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 CFAP221Q4G0U5 840 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 SLC39A12Q504Y0 691 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 WDR45BQ5MNZ6 344 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 SYCP2LQ5T4T6 812 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 LARP1BQ659C4 914 aaKnown RBP6.47□□□□□ -1.37
GYPB-204ENST00000504951 TMPRSS12Q86WS5 348 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 DAW1Q8N136 415 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 PHTF2Q8N3S3 785 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 FSIP1Q8NA03 581 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 TXNDC5Q8NBS9 432 aaKnown RBP6.47□□□□□ -1.37
GYPB-204ENST00000504951 EHBP1Q8NDI1 1231 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 CADM4Q8NFZ8 388 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 LRRC15Q8TF66 581 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 RLN3Q8WXF3 142 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 WASF1Q92558 559 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 GTF3C6Q969F1 213 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 OTUB2Q96DC9 234 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 FUBP3Q96I24 572 aaKnown RBP eCLIP6.47□□□□□ -1.37
GYPB-204ENST00000504951 DRC1Q96MC2 740 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 CAMK1GQ96NX5 476 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 SEPT5Q99719 369 aaPredicted RBP6.47□□□□□ -1.37
GYPB-204ENST00000504951 ACBD6Q9BR61 282 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 TCHPQ9BT92 498 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 GTPBP2Q9BX10 602 aaKnown RBP6.47□□□□□ -1.37
GYPB-204ENST00000504951 LINC00597Q9H2U6 94 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 TUBGCP4Q9UGJ1 667 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 C2CD2Q9Y426 696 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 PCDHB5Q9Y5E4 795 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 WASF2Q9Y6W5 498 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 TENM4Q6N022 2769 aa6.47□□□□□ -1.37
GYPB-204ENST00000504951 CABIN1Q9Y6J0 2220 aa6.46□□□□□ -1.37
GYPB-204ENST00000504951 ZNF638Q14966 1978 aaKnown RBP6.46□□□□□ -1.37
GYPB-204ENST00000504951 A0A1B0GTW7 788 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 CCDC169A6NNP5 214 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 H0YCG3 227 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 ERVH48-1M5A8F1 160 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 GFRA2O00451 464 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 TNFSF14O43557 240 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 CER1O95813 267 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 OLFM2O95897 454 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 PIGRP01833 764 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 APODP05090 189 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 GABRG2P18507 467 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 HDCP19113 662 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 GUCY2CP25092 1073 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 PEX3P56589 373 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 CFHR1Q03591 330 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 MAPK7Q13164 816 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 RTP5Q14D33 572 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 SUZ12Q15022 739 aaKnown RBP6.46□□□□□ -1.38
GYPB-204ENST00000504951 LCE2CQ5TA81 110 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 C9orf57Q5W0N0 161 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 HAUS3Q68CZ6 603 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 RHBDF2Q6PJF5 856 aa6.46□□□□□ -1.38
GYPB-204ENST00000504951 C1orf186Q6ZWK4 172 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms