RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 NR1H3Q13133 447 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 LRRC32Q14392 662 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 MTF1Q14872 753 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 ANGPT1Q15389 498 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 GOLGA7BQ2TAP0 167 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 ITPRIPL2Q3MIP1 535 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 SGO2Q562F6 1265 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 HECTD3Q5T447 861 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 PPP1R26Q5T8A7 1209 aaPredicted RBP6.28□□□□□ -1.4
SPOP-208ENST00000504889 TRIM68Q6AZZ1 485 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 PHLDB3Q6NSJ2 640 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 C1orf228Q6PIY5 440 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 TMEM270Q6UE05 265 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 RSRC2Q7L4I2 434 aaKnown RBP6.28□□□□□ -1.4
SPOP-208ENST00000504889 RRAGAQ7L523 313 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 FUKQ8N0W3 1084 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 CRYBG2Q8N1P7 616 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 DTWD2Q8NBA8 298 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 PRSS33Q8NF86 280 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 SCAMP5Q8TAC9 235 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 SH3RF2Q8TEC5 729 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 USP13Q92995 863 aaPredicted RBP6.28□□□□□ -1.4
SPOP-208ENST00000504889 TATDN2Q93075 761 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 ATP2A3Q93084 1043 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 RSPRY1Q96DX4 576 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 MSANTD3Q96H12 275 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 MYRFLQ96LU7 910 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 TWNKQ96RR1 684 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 NELL2Q99435 816 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 DUSP9Q99956 384 aaKnown RBP6.28□□□□□ -1.4
SPOP-208ENST00000504889 HINFPQ9BQA5 517 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 EBF3Q9H4W6 596 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 C8orf33Q9H7E9 229 aaPredicted RBP6.28□□□□□ -1.4
SPOP-208ENST00000504889 LTB4R2Q9NPC1 389 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 GKN1Q9NS71 199 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 DUS2Q9NX74 493 aaKnown RBP6.28□□□□□ -1.4
SPOP-208ENST00000504889 OBP2AQ9NY56 170 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 GMIPQ9P107 970 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 NAGPAQ9UK23 515 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 NME7Q9Y5B8 376 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 CPQQ9Y646 472 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 WNT6Q9Y6F9 365 aa6.28□□□□□ -1.4
SPOP-208ENST00000504889 NUP210Q8TEM1 1887 aaPredicted RBP6.28□□□□□ -1.4
SPOP-208ENST00000504889 TICRRQ7Z2Z1 1910 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 ZNF840PA6NDX5 716 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 SOBPA7XYQ1 873 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 SPECC1L-ADORA2AF8WAN1 911 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 M0QYV0 167 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 LEFTY2O00292 366 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 SCAMP3O14828 347 aaKnown RBP6.27□□□□□ -1.41
SPOP-208ENST00000504889 P4HA2O15460 535 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 CYP26A1O43174 497 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 TADA3O75528 432 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 BEST1O76090 585 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 NFATC1O95644 943 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 MBD3O95983 291 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 RALAP11233 206 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 GLULP15104 373 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 TARSP26639 723 aaKnown RBP6.27□□□□□ -1.41
SPOP-208ENST00000504889 NUBP1P53384 320 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 NHLH1Q02575 133 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 FCHO2Q0JRZ9 810 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 RUNX3Q13761 415 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 PON2Q15165 354 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 PDGFRLQ15198 375 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 ARHGAP44Q17R89 818 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 DPCR1Q3MIW9 517 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 ZC3H14Q6PJT7 736 aaKnown RBP6.27□□□□□ -1.41
SPOP-208ENST00000504889 GBP6Q6ZN66 633 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 CLEC20AQ6ZU45 233 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 TMEM150AQ86TG1 271 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 TADA2BQ86TJ2 420 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 RALGPS2Q86X27 583 aaPredicted RBP6.27□□□□□ -1.41
SPOP-208ENST00000504889 DDX42Q86XP3 938 aaKnown RBP eCLIP6.27□□□□□ -1.41
SPOP-208ENST00000504889 TRIM59Q8IWR1 403 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 ZC3H3Q8IXZ2 948 aaKnown RBP6.27□□□□□ -1.41
SPOP-208ENST00000504889 CCDC105Q8IYK2 499 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 SIX6OS1Q8N1H7 587 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 ANKRD20A12PQ8NF67 263 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 OSCP1Q8WVF1 389 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 OVCA2Q8WZ82 227 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 GOLGA1Q92805 767 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 FAXDC2Q96IV6 333 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 PCMTD1Q96MG8 357 aaPredicted RBP6.27□□□□□ -1.41
SPOP-208ENST00000504889 SLC22A12Q96S37 553 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 HNRNPABQ99729 332 aaKnown RBP6.27□□□□□ -1.41
SPOP-208ENST00000504889 SMOQ99835 787 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 CRACR2AQ9BSW2 395 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 TTLL2Q9BWV7 592 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 INTS2Q9H0H0 1204 aaKnown RBP6.27□□□□□ -1.41
SPOP-208ENST00000504889 PDCL3Q9H2J4 239 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 LMAN1LQ9HAT1 526 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 LRRC4Q9HBW1 653 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 UBE2TQ9NPD8 197 aaPredicted RBP6.27□□□□□ -1.41
SPOP-208ENST00000504889 LMBRD1Q9NUN5 540 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 COMMD8Q9NX08 183 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 CFAP97Q9P2B7 532 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 RASAL2Q9UJF2 1139 aa6.27□□□□□ -1.41
SPOP-208ENST00000504889 LSM7Q9UK45 103 aaKnown RBP6.27□□□□□ -1.41
SPOP-208ENST00000504889 TSPAN16Q9UKR8 245 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms