RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 RUNX3Q13761 415 aa26.92■■□□□ 1.9
PVT1-201ENST00000504719 WDR44Q5JSH3 913 aa26.92■■□□□ 1.9
PVT1-201ENST00000504719 MAMSTRQ6ZN01 415 aa26.92■■□□□ 1.9
PVT1-201ENST00000504719 NUP93Q8N1F7 819 aa26.92■■□□□ 1.9
PVT1-201ENST00000504719 SEMA4AQ9H3S1 761 aa26.92■■□□□ 1.9
PVT1-201ENST00000504719 EBF3Q9H4W6 596 aa26.92■■□□□ 1.9
PVT1-201ENST00000504719 PRMT8Q9NR22 394 aaPredicted RBP26.92■■□□□ 1.9
PVT1-201ENST00000504719 ZNF840PA6NDX5 716 aa26.91■■□□□ 1.9
PVT1-201ENST00000504719 TCF3P15923 654 aa26.91■■□□□ 1.9
PVT1-201ENST00000504719 PDE6CP51160 858 aa26.91■■□□□ 1.9
PVT1-201ENST00000504719 TAF10Q12962 218 aa26.91■■□□□ 1.9
PVT1-201ENST00000504719 ORC1Q13415 861 aa26.91■■□□□ 1.9
PVT1-201ENST00000504719 MTF1Q14872 753 aa26.91■■□□□ 1.9
PVT1-201ENST00000504719 KRT39Q6A163 491 aa26.91■■□□□ 1.9
PVT1-201ENST00000504719 CC2D1AQ6P1N0 951 aaPredicted RBP26.91■■□□□ 1.9
PVT1-201ENST00000504719 ZC3H14Q6PJT7 736 aaKnown RBP26.91■■□□□ 1.9
PVT1-201ENST00000504719 FUKQ8N0W3 1084 aa26.91■■□□□ 1.9
PVT1-201ENST00000504719 SMARCD1Q96GM5 515 aa26.91■■□□□ 1.9
PVT1-201ENST00000504719 KCNK16Q96T55 309 aa26.91■■□□□ 1.9
PVT1-201ENST00000504719 ARHGAP26Q9UNA1 814 aa26.91■■□□□ 1.9
PVT1-201ENST00000504719 ZFHX2Q9C0A1 2572 aaPredicted RBP26.91■■□□□ 1.9
PVT1-201ENST00000504719 RTN3O95197 1032 aaPredicted RBP26.9■■□□□ 1.9
PVT1-201ENST00000504719 INCA1Q0VD86 236 aa26.9■■□□□ 1.9
PVT1-201ENST00000504719 LRRC32Q14392 662 aa26.9■■□□□ 1.9
PVT1-201ENST00000504719 PON2Q15165 354 aa26.9■■□□□ 1.9
PVT1-201ENST00000504719 PDGFRLQ15198 375 aa26.9■■□□□ 1.9
PVT1-201ENST00000504719 TTI2Q6NXR4 508 aa26.9■■□□□ 1.9
PVT1-201ENST00000504719 DUSP9Q99956 384 aaKnown RBP26.9■■□□□ 1.9
PVT1-201ENST00000504719 CYP3A43Q9HB55 503 aa26.9■■□□□ 1.9
PVT1-201ENST00000504719 DMAP1Q9NPF5 467 aaPredicted RBP26.9■■□□□ 1.9
PVT1-201ENST00000504719 BICDL2A1A5D9 508 aa26.89■■□□□ 1.9
PVT1-201ENST00000504719 OTOL1A6NHN0 477 aaPredicted RBP26.89■■□□□ 1.9
PVT1-201ENST00000504719 TNFRSF10BO14763 440 aa26.89■■□□□ 1.9
PVT1-201ENST00000504719 SLC16A3O15427 465 aaKnown RBP26.89■■□□□ 1.9
PVT1-201ENST00000504719 AP1G2O75843 785 aa26.89■■□□□ 1.9
PVT1-201ENST00000504719 CCDC130P13994 396 aa26.89■■□□□ 1.9
PVT1-201ENST00000504719 ARSAP15289 507 aa26.89■■□□□ 1.9
PVT1-201ENST00000504719 YWHAQP27348 245 aa26.89■■□□□ 1.9
PVT1-201ENST00000504719 STX17P56962 302 aa26.89■■□□□ 1.9
PVT1-201ENST00000504719 IFRD2Q12894 506 aaPredicted RBP26.89■■□□□ 1.9
PVT1-201ENST00000504719 PAK1Q13153 545 aa26.89■■□□□ 1.9
PVT1-201ENST00000504719 DGKKQ5KSL6 1271 aa26.89■■□□□ 1.9
PVT1-201ENST00000504719 SH3RF2Q8TEC5 729 aa26.89■■□□□ 1.9
PVT1-201ENST00000504719 OSCP1Q8WVF1 389 aa26.89■■□□□ 1.9
PVT1-201ENST00000504719 SLITRK1Q96PX8 696 aa26.89■■□□□ 1.9
PVT1-201ENST00000504719 NIF3L1Q9GZT8 377 aa26.89■■□□□ 1.9
PVT1-201ENST00000504719 RBM12Q9NTZ6 932 aaKnown RBP26.89■■□□□ 1.9
PVT1-201ENST00000504719 STX10O60499 249 aa26.88■■□□□ 1.89
PVT1-201ENST00000504719 GAS6Q14393 721 aa26.88■■□□□ 1.89
PVT1-201ENST00000504719 C12orf29Q8N999 325 aa26.88■■□□□ 1.89
PVT1-201ENST00000504719 CCDC150Q8NCX0 1101 aa26.88■■□□□ 1.89
PVT1-201ENST00000504719 SLC2A14Q8TDB8 520 aa26.88■■□□□ 1.89
PVT1-201ENST00000504719 NELL1Q92832 810 aa26.88■■□□□ 1.89
PVT1-201ENST00000504719 SEMA4DQ92854 862 aa26.88■■□□□ 1.89
PVT1-201ENST00000504719 CHFRQ96EP1 664 aa26.88■■□□□ 1.89
PVT1-201ENST00000504719 TWNKQ96RR1 684 aa26.88■■□□□ 1.89
PVT1-201ENST00000504719 SMOQ99835 787 aa26.88■■□□□ 1.89
PVT1-201ENST00000504719 RNF38Q9H0F5 515 aa26.88■■□□□ 1.89
PVT1-201ENST00000504719 KRT82Q9NSB4 513 aa26.88■■□□□ 1.89
PVT1-201ENST00000504719 DUS2Q9NX74 493 aaKnown RBP26.88■■□□□ 1.89
PVT1-201ENST00000504719 IL37Q9NZH6 218 aa26.88■■□□□ 1.89
PVT1-201ENST00000504719 OLFM2O95897 454 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 MXI1P50539 228 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 SLC5A3P53794 718 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 SLC7A9P82251 487 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 ZXDBP98169 803 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 FOXR2Q6PJQ5 311 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 TSSK4Q6SA08 328 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 TTC16Q8NEE8 873 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 ZMIZ2Q8NF64 920 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 SCAMP5Q8TAC9 235 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 OVCA2Q8WZ82 227 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 FBXO32Q969P5 355 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 CSNK1G1Q9HCP0 422 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 FAM49BQ9NUQ9 324 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 COMMD8Q9NX08 183 aa26.87■■□□□ 1.89
PVT1-201ENST00000504719 CILPO75339 1184 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 BEST1O76090 585 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 ABL1P00519 1130 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 OAS1P00973 400 aaKnown RBP26.86■■□□□ 1.89
PVT1-201ENST00000504719 LMNAP02545 664 aaKnown RBP26.86■■□□□ 1.89
PVT1-201ENST00000504719 TDGF1P13385 188 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 TRIM21P19474 475 aaKnown RBP26.86■■□□□ 1.89
PVT1-201ENST00000504719 CCR3P51677 355 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 CCINQ13939 588 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 SPEM1Q8N4L4 309 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 FBXL13Q8NEE6 735 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 PDZD8Q8NEN9 1154 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 WHAMMQ8TF30 809 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 FAXDC2Q96IV6 333 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 CEP63Q96MT8 703 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 NT5C1AQ9BXI3 368 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 RAB20Q9NX57 234 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 ZSCAN32Q9NX65 697 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 PCDHGA2Q9Y5H1 932 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 WNT6Q9Y6F9 365 aa26.86■■□□□ 1.89
PVT1-201ENST00000504719 IFNAR2P48551 515 aa26.85■■□□□ 1.89
PVT1-201ENST00000504719 EML3Q32P44 896 aa26.85■■□□□ 1.89
PVT1-201ENST00000504719 DCAF17Q5H9S7 520 aaPredicted RBP26.85■■□□□ 1.89
PVT1-201ENST00000504719 FILIP1Q7Z7B0 1213 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms