RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 FAM109BQ6ICB4 259 aaPredicted RBP10.94□□□□□ -0.66
TPM3-217ENST00000504663 SLC8B1Q6J4K2 584 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 ZNF280DQ6N043 979 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 SLC26A9Q7LBE3 791 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 ZNF572Q7Z3I7 529 aaPredicted RBP10.94□□□□□ -0.66
TPM3-217ENST00000504663 DAAM2Q86T65 1068 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 ZNF558Q96NG5 402 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 SLC9A7Q96T83 725 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 TTPALQ9BTX7 342 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 SMARCAL1Q9NZC9 954 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 EHD2Q9NZN4 543 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 PRKAG2Q9UGJ0 569 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 BACE2Q9Y5Z0 518 aa10.94□□□□□ -0.66
TPM3-217ENST00000504663 OBSL1O75147 1896 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 WDR27A2RRH5 827 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 OR6C75A6NL08 312 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 TMEM110-MUSTN1A8MSY1 372 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 ZBBXA8MT70 800 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 F8VP50 259 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 URI1O94763 535 aaPredicted RBP10.93□□□□□ -0.66
TPM3-217ENST00000504663 FYNP06241 537 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 BDNFP23560 247 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 CYP2F1P24903 491 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 CTNNA1P35221 906 aaKnown RBP10.93□□□□□ -0.66
TPM3-217ENST00000504663 MAGEA11P43364 429 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 GPR15P49685 360 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 NAP1L1P55209 391 aaKnown RBP10.93□□□□□ -0.66
TPM3-217ENST00000504663 DAOAP59103 153 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 TSPY1Q01534 308 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 SLC25A11Q02978 314 aaKnown RBP10.93□□□□□ -0.66
TPM3-217ENST00000504663 ADIGQ0VDE8 80 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 GPR17Q13304 367 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 CTXN3Q4LDR2 81 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 DNTTIP2Q5QJE6 756 aaKnown RBP10.93□□□□□ -0.66
TPM3-217ENST00000504663 FAM102AQ5T9C2 384 aaPredicted RBP10.93□□□□□ -0.66
TPM3-217ENST00000504663 OR6B2Q6IFH4 312 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 HFE2Q6ZVN8 426 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 ANKS1BQ7Z6G8 1248 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 ZDHHC17Q8IUH5 632 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 PARP9Q8IXQ6 854 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 SYCE1Q8N0S2 351 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 THEM5Q8N1Q8 247 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 PHOSPHO2Q8TCD6 241 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 IPO4Q8TEX9 1081 aaKnown RBP10.93□□□□□ -0.66
TPM3-217ENST00000504663 NDRG1Q92597 394 aaKnown RBP10.93□□□□□ -0.66
TPM3-217ENST00000504663 FUBP3Q96I24 572 aaKnown RBP eCLIP10.93□□□□□ -0.66
TPM3-217ENST00000504663 YME1L1Q96TA2 773 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 PSMB7Q99436 277 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 CLSTN3Q9BQT9 956 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 HTATIP2Q9BUP3 242 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 MRPL47Q9HD33 250 aaKnown RBP10.93□□□□□ -0.66
TPM3-217ENST00000504663 PNPLA8Q9NP80 782 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 ST7Q9NRC1 585 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 CALCOCO1Q9P1Z2 691 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 AMFRQ9UKV5 643 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 SAR1BQ9Y6B6 198 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 USP3Q9Y6I4 520 aa10.93□□□□□ -0.66
TPM3-217ENST00000504663 CHD7Q9P2D1 2997 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 LAMA2P24043 3122 aaKnown RBP10.92□□□□□ -0.66
TPM3-217ENST00000504663 CES2O00748 559 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 LRCH4O75427 683 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 TADA3O75528 432 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 DAB1O75553 588 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 KRT3P12035 628 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 LCP1P13796 627 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 TFE3P19532 575 aaPredicted RBP10.92□□□□□ -0.66
TPM3-217ENST00000504663 IL1R2P27930 398 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 CXCR5P32302 372 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 MAGEA10P43363 369 aaPredicted RBP10.92□□□□□ -0.66
TPM3-217ENST00000504663 ACADSBP45954 432 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 ALDH7A1P49419 539 aaKnown RBP10.92□□□□□ -0.66
TPM3-217ENST00000504663 PGFP49763 221 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 PITX1P78337 314 aaPredicted RBP10.92□□□□□ -0.66
TPM3-217ENST00000504663 MRPS5P82675 430 aaKnown RBP10.92□□□□□ -0.66
TPM3-217ENST00000504663 ROR1Q01973 937 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 TAP1Q03518 808 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 RPS6KA1Q15418 735 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 MAPRE1Q15691 268 aaKnown RBP10.92□□□□□ -0.66
TPM3-217ENST00000504663 PSMD5Q16401 504 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 USP41Q3LFD5 358 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 CCDC14Q49A88 953 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 SH3PXD2AQ5TCZ1 1133 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 PM20D1Q6GTS8 502 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 AADACL2Q6P093 401 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 RNF19BQ6ZMZ0 732 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 ARCQ7LC44 396 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 PEX26Q7Z412 305 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 DDX53Q86TM3 631 aaKnown RBP10.92□□□□□ -0.66
TPM3-217ENST00000504663 CEP57Q86XR8 500 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 SCUBE3Q8IX30 993 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 ZDHHC14Q8IZN3 488 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 SCML4Q8N228 414 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 RASGEF1CQ8N431 466 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 STKLD1Q8NE28 680 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 SLC2A13Q96QE2 648 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 PEBP4Q96S96 227 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 HERPUD2Q9BSE4 406 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 MED10Q9BTT4 135 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 SELENOOQ9BVL4 669 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 ULBP1Q9BZM6 244 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms