RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 NPHP3-ACAD11A0A0J9YXS1 232 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 TBC1D3BA6NDS4 549 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 TK2O00142 265 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 LAD1O00515 517 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 CBFA2T3O75081 653 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 NDUFS2O75306 463 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 PRB1P04280 392 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 HOXB2P14652 356 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 SLC12A3P55017 1021 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 SLC7A9P82251 487 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 CYP4F3Q08477 520 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 PREPLQ4J6C6 727 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 ADALQ6DHV7 355 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 SLC39A4Q6P5W5 647 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 DTHD1Q6ZMT9 781 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 NUDT18Q6ZVK8 323 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 TMEM86AQ8N2M4 240 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 SETD7Q8WTS6 366 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 PKMYT1Q99640 499 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 ODF2LQ9ULJ1 636 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 L1RE1Q9UN81 338 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 CPQQ9Y646 472 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 ASXL3Q9C0F0 2248 aa16.94■□□□□ 0.3
PDLIM7-210ENST00000503827 PLA2G4BP0C869 781 aa16.93■□□□□ 0.3
PDLIM7-210ENST00000503827 PRPHP41219 470 aa16.93■□□□□ 0.3
PDLIM7-210ENST00000503827 MAGEA11P43364 429 aa16.93■□□□□ 0.3
PDLIM7-210ENST00000503827 GRIK2Q13002 908 aa16.93■□□□□ 0.3
PDLIM7-210ENST00000503827 HYIQ5T013 277 aa16.93■□□□□ 0.3
PDLIM7-210ENST00000503827 NT5DC4Q86YG4 428 aa16.93■□□□□ 0.3
PDLIM7-210ENST00000503827 MYCT1Q8N699 235 aa16.93■□□□□ 0.3
PDLIM7-210ENST00000503827 SLC39A7Q92504 469 aa16.93■□□□□ 0.3
PDLIM7-210ENST00000503827 FOXJ1Q92949 421 aa16.93■□□□□ 0.3
PDLIM7-210ENST00000503827 ZNF419Q96HQ0 510 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-210ENST00000503827 EHD2Q9NZN4 543 aa16.93■□□□□ 0.3
PDLIM7-210ENST00000503827 TBC1D14Q9P2M4 693 aa16.93■□□□□ 0.3
PDLIM7-210ENST00000503827 CYP8B1Q9UNU6 501 aa16.93■□□□□ 0.3
PDLIM7-210ENST00000503827 BPTFQ12830 3046 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 TRABD2BA6NFA1 517 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 SCAMP3O14828 347 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 PCSK1P29120 753 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 NTSR1P30989 418 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 ABCD1P33897 745 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 ABCG1P45844 678 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 PPP3CCP48454 512 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 POU5F1Q01860 360 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 GAD2Q05329 585 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 IL17AQ16552 155 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 ARSHQ5FYA8 562 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 WDR45BQ5MNZ6 344 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 BTBD8Q5XKL5 378 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 SLFN12LQ6IEE8 588 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 C4orf50Q6ZRC1 276 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 DDX42Q86XP3 938 aaKnown RBP eCLIP16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 PHTF2Q8N3S3 785 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 GALNT15Q8N3T1 639 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 CRELD1Q96HD1 420 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 CDK5RAP3Q96JB5 506 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 SPATA17Q96L03 361 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 CEP295NLQ96MC4 621 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 PLIN2Q99541 437 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 KIF2CQ99661 725 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 RNF38Q9H0F5 515 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 SMPD4Q9NXE4 827 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 CFAP97Q9P2B7 532 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 AGO2Q9UKV8 859 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 PCDHB6Q9Y5E3 794 aa16.92■□□□□ 0.3
PDLIM7-210ENST00000503827 CELSR3Q9NYQ7 3312 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 ANKRD63C9JTQ0 380 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 FAM13AO94988 1023 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 IL18RAPO95256 599 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 POLR2BP30876 1174 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 WASP42768 502 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 LHX1P48742 406 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 ANAPC15P60006 121 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 LY6G5CQ5SRR4 150 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 C10orf76Q5T2E6 689 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 SDE2Q6IQ49 451 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 VSTM1Q6UX27 236 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 DENND5BQ6ZUT9 1274 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 REEP2Q9BRK0 252 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 DEC1Q9P2X7 70 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 MAGEC2Q9UBF1 373 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 AGAP1Q9UPQ3 857 aa16.91■□□□□ 0.3
PDLIM7-210ENST00000503827 GOLGA4Q13439 2230 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 A0A1B0GTW7 788 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 ZNF840PA6NDX5 716 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 TULP1O00294 542 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 TRAK2O60296 914 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 OLFM2O95897 454 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 ABL1P00519 1130 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 ITGB3P05106 788 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 NDUFV2P19404 249 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 ANXA13P27216 316 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 MAOBP27338 520 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 GRIK1P39086 918 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 CCDC142Q17RM4 750 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 OSTM1Q86WC4 334 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 NAT16Q8N8M0 369 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 FBXO18Q8NFZ0 1043 aa16.9■□□□□ 0.3
PDLIM7-210ENST00000503827 OTUB2Q96DC9 234 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms