RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 DPY19L2P1Q6NXN4 242 aa19.27■□□□□ 0.68
PDLIM7-209ENST00000503346 GJB7Q6PEY0 223 aa19.27■□□□□ 0.68
PDLIM7-209ENST00000503346 BMP8AQ7Z5Y6 402 aa19.27■□□□□ 0.68
PDLIM7-209ENST00000503346 MFSD6LQ8IWD5 586 aa19.27■□□□□ 0.68
PDLIM7-209ENST00000503346 AOPEPQ8N6M6 819 aa19.27■□□□□ 0.68
PDLIM7-209ENST00000503346 FBXO32Q969P5 355 aa19.27■□□□□ 0.68
PDLIM7-209ENST00000503346 HSD3B7Q9H2F3 369 aa19.27■□□□□ 0.68
PDLIM7-209ENST00000503346 FBXO44Q9H4M3 255 aa19.27■□□□□ 0.68
PDLIM7-209ENST00000503346 WNT16Q9UBV4 365 aa19.27■□□□□ 0.68
PDLIM7-209ENST00000503346 LIMA1Q9UHB6 759 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-209ENST00000503346 TSPAN16Q9UKR8 245 aa19.27■□□□□ 0.68
PDLIM7-209ENST00000503346 LRRC10BA6NIK2 292 aa19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 PES1O00541 588 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 PDE6CP51160 858 aa19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 APBA1Q02410 837 aa19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 KCNMA1Q12791 1236 aa19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 IFRD2Q12894 506 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 ZNF268Q14587 947 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 GOLGA7BQ2TAP0 167 aa19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 SNX30Q5VWJ9 437 aa19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 GPRIN1Q7Z2K8 1008 aa19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 TTC30AQ86WT1 665 aa19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 ANKRD20A12PQ8NF67 263 aa19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 TFAP2BQ92481 460 aa19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 TRMT61BQ9BVS5 477 aaKnown RBP19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 VPS16Q9H269 839 aa19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 TRPC7Q9HCX4 862 aa19.26■□□□□ 0.67
PDLIM7-209ENST00000503346 MYO10Q9HD67 2058 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 TRAV19A0A0A6YYK7 116 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 C2orf78A6NCI8 922 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 SMTNL1A8MU46 457 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 DPYSL4O14531 572 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 TPM2P07951 284 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 CFHP08603 1231 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 ZDHHC11BP0C7U3 371 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 KIF11P52732 1056 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 BCAT1P54687 386 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 SLC8A3P57103 927 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 PFKPQ01813 784 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 FCHO2Q0JRZ9 810 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 GRM2Q14416 872 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 STILQ15468 1287 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 CNGA2Q16280 664 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 LCLAT1Q6UWP7 414 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 GPIHBP1Q8IV16 184 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 DHX40Q8IX18 779 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 CELF5Q8N6W0 485 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 USP13Q92995 863 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 LRRC3BQ96PB8 259 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 ZSWIM1Q9BR11 485 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 LRFN3Q9BTN0 628 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 SMG9Q9H0W8 520 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 KIF9Q9HAQ2 790 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 TDP1Q9NUW8 608 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 HESX1Q9UBX0 185 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 FBXL21Q9UKT6 434 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 SCML2Q9UQR0 700 aa19.25■□□□□ 0.67
PDLIM7-209ENST00000503346 XPO1O14980 1071 aaKnown RBP19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 OLFM2O95897 454 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 OAS1P00973 400 aaKnown RBP19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 USP17L7P0C7H9 530 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 KRT5P13647 590 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 ZNF165P49910 485 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 COPB1P53618 953 aaKnown RBP19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 BST2Q10589 180 aaKnown RBP19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 PKDCCQ504Y2 493 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 PIGZQ86VD9 579 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 ARL14EPQ8N8R7 260 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 BPIFB1Q8TDL5 484 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 SHC3Q92529 594 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 SLC22A12Q96S37 553 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 CYP2S1Q96SQ9 504 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 TRPV5Q9NQA5 729 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 GMIPQ9P107 970 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 CHORDC1Q9UHD1 332 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 DNAJC12Q9UKB3 198 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 CCL26Q9Y258 94 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 USP3Q9Y6I4 520 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 TECTAO75443 2155 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 TRIOO75962 3097 aa19.24■□□□□ 0.67
PDLIM7-209ENST00000503346 BECN2A8MW95 431 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 CKMP06732 381 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 SETSIPP0DME0 302 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 HDCP19113 662 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 CDK11BP21127 795 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 RFX1P22670 979 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 BRD2P25440 801 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 TUBP50607 506 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 PDE4CQ08493 712 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 ARHGAP44Q17R89 818 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 ZSCAN23Q3MJ62 389 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 RAB41Q5JT25 222 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 KLHDC7AQ5VTJ3 777 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 HFE2Q6ZVN8 426 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 APTXQ7Z2E3 356 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 DNASE1L2Q92874 299 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 IRF7Q92985 503 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 PBXIP1Q96AQ6 731 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 BRD9Q9H8M2 597 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms