RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SETSIPP0DME0 302 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 WEE1P30291 646 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 KIF11P52732 1056 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 POLR2FP61218 127 aaKnown RBP26.53■■□□□ 1.84
LSM6-202ENST00000502781 PDE4CQ08493 712 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 HTR4Q13639 388 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 RAB41Q5JT25 222 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 PIGZQ86VD9 579 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 ZNF606Q8WXB4 792 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 OVCA2Q8WZ82 227 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 NXPE3Q969Y0 559 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 ASB16Q96NS5 453 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 TASP1Q9H6P5 420 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 KCNK12Q9HB15 430 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 IGSF9Q9P2J2 1179 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 NCANO14594 1321 aa26.53■■□□□ 1.84
LSM6-202ENST00000502781 F8VZ95 297 aa26.52■■□□□ 1.84
LSM6-202ENST00000502781 XPO1O14980 1071 aaKnown RBP26.52■■□□□ 1.84
LSM6-202ENST00000502781 DDX6P26196 483 aaKnown RBP eCLIP26.52■■□□□ 1.84
LSM6-202ENST00000502781 GNA15P30679 374 aa26.52■■□□□ 1.84
LSM6-202ENST00000502781 USP8P40818 1118 aa26.52■■□□□ 1.84
LSM6-202ENST00000502781 PPP3CCP48454 512 aa26.52■■□□□ 1.84
LSM6-202ENST00000502781 JAM2P57087 298 aa26.52■■□□□ 1.84
LSM6-202ENST00000502781 TAF10Q12962 218 aa26.52■■□□□ 1.84
LSM6-202ENST00000502781 ARHGAP15Q53QZ3 475 aa26.52■■□□□ 1.84
LSM6-202ENST00000502781 FAM78AQ5JUQ0 283 aa26.52■■□□□ 1.84
LSM6-202ENST00000502781 NEK11Q8NG66 645 aa26.52■■□□□ 1.84
LSM6-202ENST00000502781 SLC35F5Q8WV83 523 aa26.52■■□□□ 1.84
LSM6-202ENST00000502781 FBXO44Q9H4M3 255 aa26.52■■□□□ 1.84
LSM6-202ENST00000502781 TRPV4Q9HBA0 871 aa26.52■■□□□ 1.84
LSM6-202ENST00000502781 USP3Q9Y6I4 520 aa26.52■■□□□ 1.84
LSM6-202ENST00000502781 TULP2O00295 520 aa26.51■■□□□ 1.83
LSM6-202ENST00000502781 PLA2G4AP47712 749 aa26.51■■□□□ 1.83
LSM6-202ENST00000502781 SLC8A3P57103 927 aa26.51■■□□□ 1.83
LSM6-202ENST00000502781 PTK2Q05397 1052 aa26.51■■□□□ 1.83
LSM6-202ENST00000502781 GPR158Q5T848 1215 aa26.51■■□□□ 1.83
LSM6-202ENST00000502781 PARM1Q6UWI2 310 aa26.51■■□□□ 1.83
LSM6-202ENST00000502781 MON1AQ86VX9 555 aa26.51■■□□□ 1.83
LSM6-202ENST00000502781 UBA3Q8TBC4 463 aa26.51■■□□□ 1.83
LSM6-202ENST00000502781 MRPS31Q92665 395 aaKnown RBP26.51■■□□□ 1.83
LSM6-202ENST00000502781 FGF14Q92915 247 aa26.51■■□□□ 1.83
LSM6-202ENST00000502781 SMARCD2Q92925 531 aa26.51■■□□□ 1.83
LSM6-202ENST00000502781 SLITRK1Q96PX8 696 aa26.51■■□□□ 1.83
LSM6-202ENST00000502781 SLC46A2Q9BY10 475 aa26.51■■□□□ 1.83
LSM6-202ENST00000502781 PATJQ8NI35 1801 aa26.51■■□□□ 1.83
LSM6-202ENST00000502781 ZNF840PA6NDX5 716 aa26.5■■□□□ 1.83
LSM6-202ENST00000502781 ASGR2P07307 311 aa26.5■■□□□ 1.83
LSM6-202ENST00000502781 ZDHHC11BP0C7U3 371 aa26.5■■□□□ 1.83
LSM6-202ENST00000502781 FCARP24071 287 aa26.5■■□□□ 1.83
LSM6-202ENST00000502781 UBASH3AP57075 661 aa26.5■■□□□ 1.83
LSM6-202ENST00000502781 BPIFB4P59827 614 aa26.5■■□□□ 1.83
LSM6-202ENST00000502781 SNX30Q5VWJ9 437 aa26.5■■□□□ 1.83
LSM6-202ENST00000502781 MTSS1LQ765P7 747 aa26.5■■□□□ 1.83
LSM6-202ENST00000502781 PDZD8Q8NEN9 1154 aa26.5■■□□□ 1.83
LSM6-202ENST00000502781 ZSCAN18Q8TBC5 510 aaPredicted RBP26.5■■□□□ 1.83
LSM6-202ENST00000502781 PCMTD1Q96MG8 357 aaPredicted RBP26.5■■□□□ 1.83
LSM6-202ENST00000502781 TRPM5Q9NZQ8 1165 aa26.5■■□□□ 1.83
LSM6-202ENST00000502781 CUL9Q8IWT3 2517 aa26.5■■□□□ 1.83
LSM6-202ENST00000502781 MUC3AQ02505 3323 aa26.49■■□□□ 1.83
LSM6-202ENST00000502781 M0QYV0 167 aa26.49■■□□□ 1.83
LSM6-202ENST00000502781 THAP12O43422 761 aa26.49■■□□□ 1.83
LSM6-202ENST00000502781 MED7O43513 233 aa26.49■■□□□ 1.83
LSM6-202ENST00000502781 PBX1P40424 430 aa26.49■■□□□ 1.83
LSM6-202ENST00000502781 TXNDC8Q6A555 127 aa26.49■■□□□ 1.83
LSM6-202ENST00000502781 SLC47A2Q86VL8 602 aa26.49■■□□□ 1.83
LSM6-202ENST00000502781 RNF214Q8ND24 703 aa26.49■■□□□ 1.83
LSM6-202ENST00000502781 KCTD13Q8WZ19 329 aa26.49■■□□□ 1.83
LSM6-202ENST00000502781 FBXO32Q969P5 355 aa26.49■■□□□ 1.83
LSM6-202ENST00000502781 SLITRK6Q9H5Y7 841 aa26.49■■□□□ 1.83
LSM6-202ENST00000502781 NLRC4Q9NPP4 1024 aa26.49■■□□□ 1.83
LSM6-202ENST00000502781 SCML2Q9UQR0 700 aa26.49■■□□□ 1.83
LSM6-202ENST00000502781 NUMBLQ9Y6R0 609 aa26.49■■□□□ 1.83
LSM6-202ENST00000502781 PFKLP17858 780 aa26.48■■□□□ 1.83
LSM6-202ENST00000502781 MYH10P35580 1976 aa26.48■■□□□ 1.83
LSM6-202ENST00000502781 GPD2P43304 727 aa26.48■■□□□ 1.83
LSM6-202ENST00000502781 IFRD2Q12894 506 aaPredicted RBP26.48■■□□□ 1.83
LSM6-202ENST00000502781 ZNF638Q14966 1978 aaKnown RBP26.48■■□□□ 1.83
LSM6-202ENST00000502781 PTPN21Q16825 1174 aa26.48■■□□□ 1.83
LSM6-202ENST00000502781 CMTM8Q8IZV2 173 aa26.48■■□□□ 1.83
LSM6-202ENST00000502781 RSAD2Q8WXG1 361 aa26.48■■□□□ 1.83
LSM6-202ENST00000502781 SECISBP2LQ93073 1101 aaKnown RBP26.48■■□□□ 1.83
LSM6-202ENST00000502781 RPP25Q9BUL9 199 aaKnown RBP26.48■■□□□ 1.83
LSM6-202ENST00000502781 PCDHGC3Q9UN70 934 aa26.48■■□□□ 1.83
LSM6-202ENST00000502781 MYO10Q9HD67 2058 aa26.48■■□□□ 1.83
LSM6-202ENST00000502781 DENND4CQ5VZ89 1909 aa26.48■■□□□ 1.83
LSM6-202ENST00000502781 ECI2O75521 394 aa26.47■■□□□ 1.83
LSM6-202ENST00000502781 GABBR2O75899 941 aa26.47■■□□□ 1.83
LSM6-202ENST00000502781 CFHP08603 1231 aa26.47■■□□□ 1.83
LSM6-202ENST00000502781 SOX5P35711 763 aa26.47■■□□□ 1.83
LSM6-202ENST00000502781 RPL34P49207 117 aaKnown RBP26.47■■□□□ 1.83
LSM6-202ENST00000502781 TANGO2Q6ICL3 276 aa26.47■■□□□ 1.83
LSM6-202ENST00000502781 PMF1Q6P1K2 205 aa26.47■■□□□ 1.83
LSM6-202ENST00000502781 CCDC186Q7Z3E2 898 aa26.47■■□□□ 1.83
LSM6-202ENST00000502781 ARID3BQ8IVW6 561 aaPredicted RBP26.47■■□□□ 1.83
LSM6-202ENST00000502781 MAB21L3Q8N8X9 362 aa26.47■■□□□ 1.83
LSM6-202ENST00000502781 KHSRPQ92945 711 aaKnown RBP eCLIP26.47■■□□□ 1.83
LSM6-202ENST00000502781 SORCS3Q9UPU3 1222 aa26.47■■□□□ 1.83
LSM6-202ENST00000502781 OBSL1O75147 1896 aa26.47■■□□□ 1.83
LSM6-202ENST00000502781 C2orf78A6NCI8 922 aa26.46■■□□□ 1.83
LSM6-202ENST00000502781 OAS1P00973 400 aaKnown RBP26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms