RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 SCOCQ9UIL1 159 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 USP18Q9UMW8 372 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 PSAT1Q9Y617 370 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 CDY2AQ9Y6F7 541 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 ZFP37Q9Y6Q3 630 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 DISP3Q9P2K9 1392 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 CD163L1Q9NR16 1453 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 KIF1AQ12756 1690 aa4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 CPSF1Q10570 1443 aaKnown RBP4.72□□□□□ -1.65
HMGB1P21-201ENST00000502313 CDK12Q9NYV4 1490 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 H0Y626 953 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 GTPBP1O00178 669 aaKnown RBP4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 KIAA0355O15063 1070 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 KRT38O76015 456 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 ACTL6BO94805 426 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 PCDH8O95206 1070 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 PFKMP08237 780 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 CSH1P0DML2 217 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 CSH2P0DML3 217 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 ACADMP11310 421 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 HADHAP40939 763 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 HNF4AP41235 474 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 CLCN2P51788 898 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 ZNF132P52740 706 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 PPP5CP53041 499 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 NRG3P56975 720 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 NLRP5P59047 1200 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 ERVFRD-1P60508 538 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 MRPS35P82673 323 aaKnown RBP4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 PRR5P85299 388 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 UBXN1Q04323 297 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 PPARAQ07869 468 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 GALNT2Q10471 571 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 DBPQ10586 325 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 CHAF1BQ13112 559 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 SNAPC2Q13487 334 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 ACVR2BQ13705 512 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 TBCEQ15813 527 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 TMEM266Q2M3C6 531 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 ARMC4Q5T2S8 1044 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 CNSTQ6PJW8 725 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 NLRP14Q86W24 1093 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 PPP1R3BQ86XI6 285 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 FAM126BQ8IXS8 530 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 RTKN2Q8IZC4 609 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 SAMD14Q8IZD0 417 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 OR14C36Q8NHC7 312 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 TBC1D22AQ8WUA7 517 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 RUFY2Q8WXA3 655 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 THAP4Q8WY91 577 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 FOXRED1Q96CU9 486 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 TSPAN17Q96FV3 270 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 KIRREL1Q96J84 757 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 SAMD11Q96NU1 681 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 FNBP1Q96RU3 617 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 C7orf25Q9BPX7 421 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 RNF32Q9H0A6 362 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 C2orf40Q9H1Z8 148 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 GREM2Q9H772 168 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 NECTIN3Q9NQS3 549 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 CNNM1Q9NRU3 951 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 PIH1D1Q9NWS0 290 aaKnown RBP4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 STK26Q9P289 416 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 EPS15L1Q9UBC2 864 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 LPAR3Q9UBY5 353 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 GTF3C4Q9UKN8 822 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 YBX2Q9Y2T7 364 aaKnown RBP4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 RRP15Q9Y3B9 282 aaKnown RBP4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 TELO2Q9Y4R8 837 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 HS3ST4Q9Y661 456 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 NPHP3Q7Z494 1330 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 MYPNQ86TC9 1320 aa4.71□□□□□ -1.66
HMGB1P21-201ENST00000502313 RGPD8O14715 1765 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 TRIM43BA6NCK2 446 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 AGAP14A8MT82 685 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 PTGES3LE9PB15 166 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 MPHOSPH10O00566 681 aaKnown RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 UBE2CO00762 179 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 FYB1O15117 783 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 PRLP01236 227 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 AHSGP02765 367 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 TUBB4AP04350 444 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 RPLP2P05387 115 aaKnown RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 PRKCBP05771 671 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 ENO2P09104 434 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 THEGLP0DJG4 465 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 NR2F1P10589 423 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 SCG2P13521 617 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 HDCP19113 662 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 SDHBP21912 280 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 ATP5DP30049 168 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 NNMTP40261 264 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 RGS2P41220 211 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 CD97P48960 835 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 MAPKAPK2P49137 400 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 AP2B1P63010 937 aa4.7□□□□□ -1.66
HMGB1P21-201ENST00000502313 DLG4P78352 724 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms