RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 ATICP31939 592 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 PHBP35232 272 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 ZNF143P52747 638 aaPredicted RBP10.31□□□□□ -0.76
CLIP1-204ENST00000501271 NDST1P52848 882 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 ARHGAP1Q07960 439 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 TTLL4Q14679 1199 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 E2F5Q15329 346 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 SYCP2LQ5T4T6 812 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 WLSQ5T9L3 541 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 LVRNQ6Q4G3 990 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 ADGRD1Q6QNK2 874 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 FAM183BPQ6ZVS7 135 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 ZC3H18Q86VM9 953 aaKnown RBP10.31□□□□□ -0.76
CLIP1-204ENST00000501271 IGDCC3Q8IVU1 814 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 LINC01465Q8N7H1 131 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 DCPSQ96C86 337 aaKnown RBP10.31□□□□□ -0.76
CLIP1-204ENST00000501271 KLHL29Q96CT2 875 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 CYP3A43Q9HB55 503 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 ASNSD1Q9NWL6 643 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 FETUBQ9UGM5 382 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 SPDYE5A6NIY4 337 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 C2CD4BA6NLJ0 364 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 A8MUI8 341 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 E5RJQ4 531 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 GRAP2O75791 330 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 ENDOD1O94919 500 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 LGALS2P05162 132 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 CCNB1P14635 433 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 GPD1P21695 349 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 PCK1P35558 622 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 CDH6P55285 790 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 TNFAIP2Q03169 654 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 CCDC15Q0P6D6 951 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 INCA1Q0VD86 236 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 DPYSL3Q14195 570 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 TMEM132DQ14C87 1099 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 ACAP1Q15027 740 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 NOMO1Q15155 1222 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 CDO1Q16878 200 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 LRRC8CQ8TDW0 803 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 DCAKDQ8WVC6 231 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 RXFP2Q8WXD0 754 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 MYLK2Q9H1R3 596 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 C12orf65Q9H3J6 166 aaKnown RBP10.31□□□□□ -0.76
CLIP1-204ENST00000501271 ASB7Q9H672 318 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 RSAD1Q9HA92 442 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 ARHGEF3Q9NR81 526 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 TSPAN16Q9UKR8 245 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 CHMP2BQ9UQN3 213 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 AKT3Q9Y243 479 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 CHKBQ9Y259 395 aa10.31□□□□□ -0.76
CLIP1-204ENST00000501271 KAT6AQ92794 2004 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 GOLGA8RI6L899 631 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 CXCL11O14625 94 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 PFKMP08237 780 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 ZNF286BP0CG31 522 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 IBSPP21815 317 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-204ENST00000501271 ADRA1DP25100 572 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 ROR1Q01973 937 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 RIPK1Q13546 671 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 R3HDM1Q15032 1099 aaKnown RBP10.3□□□□□ -0.76
CLIP1-204ENST00000501271 KLHL38Q2WGJ6 581 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 ZNF484Q5JVG2 852 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 HHATQ5VTY9 493 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 ARMCX2Q7L311 632 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 PDIK1LQ8N165 341 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 C12orf29Q8N999 325 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 ERP27Q96DN0 273 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 TBC1D31Q96DN5 1066 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 KLF6Q99612 283 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-204ENST00000501271 CNPY3Q9BT09 278 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 SSU72Q9NP77 194 aaKnown RBP10.3□□□□□ -0.76
CLIP1-204ENST00000501271 ADARB2Q9NS39 739 aaKnown RBP10.3□□□□□ -0.76
CLIP1-204ENST00000501271 BARX2Q9UMQ3 279 aaPredicted RBP10.3□□□□□ -0.76
CLIP1-204ENST00000501271 KCNH4Q9UQ05 1017 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 PLXNB2O15031 1838 aa10.3□□□□□ -0.76
CLIP1-204ENST00000501271 UNC5CO95185 931 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 ZWINTO95229 277 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 P4HA1P13674 534 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 PDGFRAP16234 1089 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 SLC8A1P32418 973 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 ELK3P41970 407 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 YARSP54577 528 aaKnown RBP10.29□□□□□ -0.76
CLIP1-204ENST00000501271 RNASELQ05823 741 aaKnown RBP10.29□□□□□ -0.76
CLIP1-204ENST00000501271 POU5F1BQ06416 359 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 OR6B2Q6IFH4 312 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 DARS2Q6PI48 645 aaKnown RBP10.29□□□□□ -0.76
CLIP1-204ENST00000501271 PALM2Q8IXS6 379 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 ANKRD13AQ8IZ07 590 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 AGGF1Q8N302 714 aaeCLIP10.29□□□□□ -0.76
CLIP1-204ENST00000501271 C10orf82Q8WW14 230 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 CXCL16Q9H2A7 254 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 RALGAPA2Q2PPJ7 1873 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 TSPAN1O60635 241 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 ALADP13716 330 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 SKIV2L2P42285 1042 aaKnown RBP10.29□□□□□ -0.76
CLIP1-204ENST00000501271 MSH2P43246 934 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 RGS7P49802 495 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 ATP11AP98196 1134 aa10.29□□□□□ -0.76
CLIP1-204ENST00000501271 KCNJ11Q14654 390 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms