RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 BTG4Q9NY30 223 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 USP19O94966 1318 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 FRMPD2Q68DX3 1309 aaPredicted RBP11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 A0A0G2JPF8 293 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 HNRNPCL3B7ZW38 293 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 HNRNPCL4P0DMR1 293 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 BTKQ06187 659 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 ERICH5Q6P6B1 374 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 KCNIP3Q9Y2W7 256 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 SOWAHDA6NJG2 315 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 C2orf81A6NN90 581 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 ITIH2P19823 946 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 PDK1Q15118 436 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 AGBL2Q5U5Z8 902 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 FAM160B2Q86V87 743 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 MYL10Q9BUA6 226 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 GSDMCQ9BYG8 508 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 ARHGAP28Q9P2N2 729 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 DOPEY2Q9Y3R5 2298 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 TMCC2O75069 709 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 ATG7O95352 703 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 NUDT2P50583 147 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 NCAPHQ15003 741 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 EIF3MQ7L2H7 374 aaKnown RBP11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 FNIP1Q8TF40 1166 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 ERP27Q96DN0 273 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 HPS4Q9NQG7 708 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 KIAA0391O15091 583 aaKnown RBP11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 ZNF806P0C7X5 589 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 HOXD10P28358 340 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 UCMAQ8WVF2 138 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 RIN2Q8WYP3 895 aaPredicted RBP11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 SMAD5Q99717 465 aaKnown RBP11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 TNKSO95271 1327 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 CCNCP24863 283 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 TRAF2Q12933 501 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 CXXC5Q7LFL8 322 aaKnown RBP11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 SSH3Q8TE77 659 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 NEDD4LQ96PU5 975 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 ZCWPW1Q9H0M4 648 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 GOLPH3Q9H4A6 298 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 PRDM5Q9NQX1 630 aaPredicted RBP11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 PTPRTO14522 1441 aa11.56□□□□□ -0.56
AC055713.1-201ENST00000498967 MAGEB3O15480 346 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 PHGDHO43175 533 aaKnown RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 HOXB6P17509 224 aaKnown RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 NFKB1P19838 968 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 GTF2H1P32780 548 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 ZAP70P43403 619 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 NME3Q13232 169 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 MAPK11Q15759 364 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 ME3Q16798 604 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 AADATQ8N5Z0 425 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 PAK5Q9P286 719 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 FBXO40Q9UH90 709 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 ZNF232Q9UNY5 417 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 CLIC2O15247 247 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 JAK2O60674 1132 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 TRIM3O75382 744 aaPredicted RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 CAPGP40121 348 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 GPC3P51654 580 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 IL2P60568 153 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 QPRTQ15274 297 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 TMED8Q6PL24 325 aaPredicted RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 UGT2B28Q9BY64 529 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 ABCC4O15439 1325 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 KIF28PB7ZC32 967 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 SEC24BO95487 1268 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 CES1P23141 567 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 PSMB9P28065 219 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 SRP54P61011 504 aaKnown RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 RNF123Q5XPI4 1314 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 ZBTB49Q6ZSB9 765 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 MRPL4Q9BYD3 311 aaKnown RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 GPC6Q9Y625 555 aaPredicted RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 GATBO75879 557 aaKnown RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 NFYCQ13952 458 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 INTS11Q5TA45 600 aaKnown RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 GPN3Q9UHW5 284 aaPredicted RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 A0A087WXM4 84 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 ATP9BO43861 1147 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 RNASEH1O60930 286 aaKnown RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 FAM58BPP0C7Q3 252 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 UBTFL6P0CB48 400 aaPredicted RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 ITIH1P19827 911 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 MRNIPQ6NTE8 343 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 CCNJLQ8IV13 435 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 ATXN7L3BQ96GX2 97 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 EMILIN2Q9BXX0 1053 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 DUSP12Q9UNI6 340 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 PLOD2O00469 737 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 TCN1P20061 433 aaPredicted RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 ATP6V1B2P21281 511 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 PTSQ03393 145 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 ZNF827Q17R98 1081 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 HLA-DQA1Q5Y7H0 255 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 OLFML1Q6UWY5 402 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 RFFLQ8WZ73 363 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 PAIP1Q9H074 479 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms