RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 TSG101Q99816 390 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 FBRSL1Q9HCM7 1045 aaKnown RBP17.1■□□□□ 0.33
NR1H3-227ENST00000498548 KRT82Q9NSB4 513 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 C2orf42Q9NWW7 574 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 SMPD4Q9NXE4 827 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 ATP8B3O60423 1300 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 LEFTY2O00292 366 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 TNFRSF10BO14763 440 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 SCAMP3O14828 347 aaKnown RBP17.09■□□□□ 0.33
NR1H3-227ENST00000498548 IFNAR2P48551 515 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 LRRC32Q14392 662 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 ZNF528Q3MIS6 628 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 ZNF394Q53GI3 561 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 DCAF17Q5H9S7 520 aaPredicted RBP17.09■□□□□ 0.33
NR1H3-227ENST00000498548 TCERG1LQ5VWI1 586 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 KRT39Q6A163 491 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 UNC93AQ86WB7 457 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 WHAMMQ8TF30 809 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 OSCP1Q8WVF1 389 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 TATDN2Q93075 761 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 JAKMIP2Q96AA8 810 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 SMARCD1Q96GM5 515 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 IMPG2Q9BZV3 1241 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 DMAP1Q9NPF5 467 aaPredicted RBP17.09■□□□□ 0.33
NR1H3-227ENST00000498548 PRMT8Q9NR22 394 aaPredicted RBP17.09■□□□□ 0.33
NR1H3-227ENST00000498548 EHD2Q9NZN4 543 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 HOOK1Q9UJC3 728 aaKnown RBP17.09■□□□□ 0.33
NR1H3-227ENST00000498548 ARHGAP26Q9UNA1 814 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 CPQQ9Y646 472 aa17.09■□□□□ 0.33
NR1H3-227ENST00000498548 BIN1O00499 593 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 KINO60870 393 aaKnown RBP17.08■□□□□ 0.32
NR1H3-227ENST00000498548 RTN3O95197 1032 aaPredicted RBP17.08■□□□□ 0.32
NR1H3-227ENST00000498548 LMNAP02545 664 aaKnown RBP17.08■□□□□ 0.32
NR1H3-227ENST00000498548 GTF2H1P32780 548 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 GALK1P51570 392 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 SLC5A3P53794 718 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 ENPEPQ07075 957 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 PDGFRLQ15198 375 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 CBWD6Q4V339 395 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 COBLL1Q53SF7 1204 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 CBWD3Q5JTY5 395 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 CBWD5Q5RIA9 395 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 FSTL4Q6MZW2 842 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 C1orf228Q6PIY5 440 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 ZC3H14Q6PJT7 736 aaKnown RBP17.08■□□□□ 0.32
NR1H3-227ENST00000498548 CYFIP2Q96F07 1278 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 SLITRK1Q96PX8 696 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 NIF3L1Q9GZT8 377 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 ECT2Q9H8V3 914 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 CYP3A43Q9HB55 503 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 RAB20Q9NX57 234 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 PIEZO1Q92508 2521 aa17.08■□□□□ 0.32
NR1H3-227ENST00000498548 OAS1P00973 400 aaKnown RBP17.07■□□□□ 0.32
NR1H3-227ENST00000498548 EGFP01133 1207 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 MBL2P11226 248 aaPredicted RBP17.07■□□□□ 0.32
NR1H3-227ENST00000498548 GJA4P35212 333 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 CXCL12P48061 93 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 PPP3CCP48454 512 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 PGFP49763 221 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 MXI1P50539 228 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 MCCD1P59942 119 aaPredicted RBP17.07■□□□□ 0.32
NR1H3-227ENST00000498548 FKBP3Q00688 224 aaKnown RBP17.07■□□□□ 0.32
NR1H3-227ENST00000498548 DMWDQ09019 674 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 INCA1Q0VD86 236 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 CCINQ13939 588 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 EML3Q32P44 896 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 DGKKQ5KSL6 1271 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 KLHL10Q6JEL2 608 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 PKN3Q6P5Z2 889 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 ZC3H3Q8IXZ2 948 aaKnown RBP17.07■□□□□ 0.32
NR1H3-227ENST00000498548 CCDC150Q8NCX0 1101 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 ATRIPQ8WXE1 791 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 NT5C1AQ9BXI3 368 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 ZSCAN32Q9NX65 697 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 GMIPQ9P107 970 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 MYOFQ9NZM1 2061 aa17.07■□□□□ 0.32
NR1H3-227ENST00000498548 ZFHX2Q9C0A1 2572 aaPredicted RBP17.06■□□□□ 0.32
NR1H3-227ENST00000498548 MYO16Q9Y6X6 1858 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 CILPO75339 1184 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 TDGF1P13385 188 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 BMP6P22004 513 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 PDE6CP51160 858 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 CCR3P51677 355 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 SLC7A9P82251 487 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 TMEM196Q5HYL7 178 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 GPRIN1Q7Z2K8 1008 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 SPEM1Q8N4L4 309 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 CPA6Q8N4T0 437 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 DCLK2Q8N568 766 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 FBXL13Q8NEE6 735 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 HNRNPABQ99729 332 aaKnown RBP17.06■□□□□ 0.32
NR1H3-227ENST00000498548 ARID3AQ99856 593 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 SEMA4AQ9H3S1 761 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 CCSER2Q9H7U1 834 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 CSNK1G1Q9HCP0 422 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 POLR3BQ9NW08 1133 aaPredicted RBP17.06■□□□□ 0.32
NR1H3-227ENST00000498548 IL37Q9NZH6 218 aa17.06■□□□□ 0.32
NR1H3-227ENST00000498548 VPS13AQ96RL7 3174 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 PPP1R3GB7ZBB8 358 aa17.05■□□□□ 0.32
NR1H3-227ENST00000498548 TRDMT1O14717 391 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms