RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 PCDHB13Q9Y5F0 798 aa17.16■□□□□ 0.34
MUC1-220ENST00000498431 CPQQ9Y646 472 aa17.16■□□□□ 0.34
MUC1-220ENST00000498431 PKD1L2Q7Z442 2459 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 GON4LQ3T8J9 2241 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 A0A087X0B3 334 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 FRMD3A2A2Y4 597 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 ZNF840PA6NDX5 716 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 F8VP50 259 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 PDE6CP51160 858 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 SLC7A9P82251 487 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 MRPS21P82921 87 aaKnown RBP17.15■□□□□ 0.34
MUC1-220ENST00000498431 MYO1EQ12965 1108 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 TRIM61Q5EBN2 209 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 RRAGBQ5VZM2 374 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 KIAA1211LQ6NV74 962 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 DPH6Q7L8W6 267 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 TMEFF1Q8IYR6 380 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 GPD1LQ8N335 351 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 GLIS3Q8NEA6 775 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 ANKRD36BP1Q96IX9 119 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 CFAP97Q9P2B7 532 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 CCDC39Q9UFE4 941 aa17.15■□□□□ 0.34
MUC1-220ENST00000498431 EVLQ9UI08 416 aaPredicted RBP17.15■□□□□ 0.34
MUC1-220ENST00000498431 ATXN2Q99700 1313 aaKnown RBP17.15■□□□□ 0.34
MUC1-220ENST00000498431 CACNA1EQ15878 2313 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 PLXND1Q9Y4D7 1925 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 ADAM23O75077 832 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 KAT7O95251 611 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 OLFM2O95897 454 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 OAS1P00973 400 aaKnown RBP17.14■□□□□ 0.33
MUC1-220ENST00000498431 WARSP23381 471 aaKnown RBP17.14■□□□□ 0.33
MUC1-220ENST00000498431 MAPK8P45983 427 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 KDSRQ06136 332 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 MDH1BQ5I0G3 518 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 RHBDF2Q6PJF5 856 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 CBWD2Q8IUF1 395 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 MYCBPAPQ8TBZ2 947 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 PNKPQ96T60 521 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 MRPL45Q9BRJ2 306 aaKnown RBP17.14■□□□□ 0.33
MUC1-220ENST00000498431 PANK2Q9BZ23 570 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 FSCN3Q9NQT6 498 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 ITPR1Q14643 2758 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 PI4KAP42356 2102 aa17.14■□□□□ 0.33
MUC1-220ENST00000498431 ADAMTS9Q9P2N4 1935 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 ALDH1A2O94788 518 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 ABL1P00519 1130 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 PFKLP17858 780 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 ANXA13P27216 316 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 KIR2DL1P43626 348 aaPredicted RBP17.13■□□□□ 0.33
MUC1-220ENST00000498431 NOP14P78316 857 aaKnown RBP17.13■□□□□ 0.33
MUC1-220ENST00000498431 TAF10Q12962 218 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 RESTQ13127 1097 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 MAP7D1Q3KQU3 841 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 FAM173BQ6P4H8 233 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 LPCAT2Q7L5N7 544 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 PHTF2Q8N3S3 785 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 WHAMMQ8TF30 809 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 HMGB4Q8WW32 186 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 HPS3Q969F9 1004 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 MMS19Q96T76 1030 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 PANK4Q9NVE7 773 aa17.13■□□□□ 0.33
MUC1-220ENST00000498431 SRPRBQ9Y5M8 271 aaKnown RBP17.13■□□□□ 0.33
MUC1-220ENST00000498431 MYO18AQ92614 2054 aaKnown RBP17.12■□□□□ 0.33
MUC1-220ENST00000498431 LAMA5O15230 3695 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 VPS37CA5D8V6 355 aaPredicted RBP17.12■□□□□ 0.33
MUC1-220ENST00000498431 TNFRSF10BO14763 440 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 TRIM66O15016 1216 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 MAP3K13O43283 966 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 HYAL3O43820 417 aaPredicted RBP17.12■□□□□ 0.33
MUC1-220ENST00000498431 TNNC2P02585 160 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 APODP05090 189 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 ENGP17813 658 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 IFRD2Q12894 506 aaPredicted RBP17.12■□□□□ 0.33
MUC1-220ENST00000498431 ALCAMQ13740 583 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 MAPRE1Q15691 268 aaKnown RBP17.12■□□□□ 0.33
MUC1-220ENST00000498431 HS2ST1Q7LGA3 356 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 SYT12Q8IV01 421 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 SPACA7Q96KW9 195 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 C8orf48Q96LL4 319 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 CEP295NLQ96MC4 621 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 NUSAP1Q9BXS6 441 aaKnown RBP17.12■□□□□ 0.33
MUC1-220ENST00000498431 DPEP3Q9H4B8 488 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 ARHGEF4Q9NR80 690 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 BCCIPQ9P287 314 aaKnown RBP eCLIP17.12■□□□□ 0.33
MUC1-220ENST00000498431 R3HCC1Q9Y3T6 440 aaKnown RBP17.12■□□□□ 0.33
MUC1-220ENST00000498431 PCNX2A6NKB5 2137 aa17.12■□□□□ 0.33
MUC1-220ENST00000498431 A0A0A0MRY4 1105 aa17.11■□□□□ 0.33
MUC1-220ENST00000498431 TCRBV21S2A2A0A5A6 115 aa17.11■□□□□ 0.33
MUC1-220ENST00000498431 ZNF233A6NK53 670 aa17.11■□□□□ 0.33
MUC1-220ENST00000498431 SRRM3A6NNA2 597 aaPredicted RBP17.11■□□□□ 0.33
MUC1-220ENST00000498431 CLDN5O00501 218 aa17.11■□□□□ 0.33
MUC1-220ENST00000498431 SLC9A3R1O14745 358 aaPredicted RBP17.11■□□□□ 0.33
MUC1-220ENST00000498431 CST3P01034 146 aaPredicted RBP17.11■□□□□ 0.33
MUC1-220ENST00000498431 MBL2P11226 248 aaPredicted RBP17.11■□□□□ 0.33
MUC1-220ENST00000498431 ADH5P11766 374 aa17.11■□□□□ 0.33
MUC1-220ENST00000498431 ITPKAP23677 461 aa17.11■□□□□ 0.33
MUC1-220ENST00000498431 HOXD13P35453 343 aa17.11■□□□□ 0.33
MUC1-220ENST00000498431 EIF2DP41214 584 aaKnown RBP17.11■□□□□ 0.33
MUC1-220ENST00000498431 CEBPZQ03701 1054 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms