RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 GRIA2P42262 883 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 PSMC1P62191 440 aaKnown RBP12.48□□□□□ -0.41
CDK9-205ENST00000498339 CYP27A1Q02318 531 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 IFRD2Q12894 506 aaPredicted RBP12.48□□□□□ -0.41
CDK9-205ENST00000498339 PLEKHG6Q3KR16 790 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 CFAP221Q4G0U5 840 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 TRMT11Q7Z4G4 463 aaKnown RBP12.48□□□□□ -0.41
CDK9-205ENST00000498339 NT5DC4Q86YG4 428 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 NAXDQ8IW45 347 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 ZNF513Q8N8E2 541 aaPredicted RBP12.48□□□□□ -0.41
CDK9-205ENST00000498339 MDM1Q8TC05 714 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 MYLPFQ96A32 169 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 ERLEC1Q96DZ1 483 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 CALML4Q96GE6 196 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 FUBP3Q96I24 572 aaKnown RBP eCLIP12.48□□□□□ -0.41
CDK9-205ENST00000498339 FAM213AQ9BRX8 229 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 CAPN10Q9HC96 672 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.48□□□□□ -0.41
CDK9-205ENST00000498339 CALCOCO1Q9P1Z2 691 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 CFAP97Q9P2B7 532 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 MAGEC2Q9UBF1 373 aaPredicted RBP12.48□□□□□ -0.41
CDK9-205ENST00000498339 LIMCH1Q9UPQ0 1083 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 RAXQ9Y2V3 346 aa12.48□□□□□ -0.41
CDK9-205ENST00000498339 GCN1Q92616 2671 aaKnown RBP12.48□□□□□ -0.41
CDK9-205ENST00000498339 MYH10P35580 1976 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 TBC1D3BA6NDS4 549 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 ADAM23O75077 832 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 MBL2P11226 248 aaPredicted RBP12.47□□□□□ -0.41
CDK9-205ENST00000498339 CD59P13987 128 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 HOXB2P14652 356 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 PFKLP17858 780 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 PLCG1P19174 1290 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 BDNFP23560 247 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 KIR2DL1P43626 348 aaPredicted RBP12.47□□□□□ -0.41
CDK9-205ENST00000498339 LHX1P48742 406 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 ZXDBP98169 803 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 GTF2BQ00403 316 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 MESP2Q0VG99 397 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 MCM6Q14566 821 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 BTBD8Q5XKL5 378 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 DENND5BQ6ZUT9 1274 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 OSTM1Q86WC4 334 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 CSGALNACT2Q8N6G5 542 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 NAT16Q8N8M0 369 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 TRIML1Q8N9V2 468 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 CACTINQ8WUQ7 758 aaKnown RBP12.47□□□□□ -0.41
CDK9-205ENST00000498339 ADAMTS14Q8WXS8 1223 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 KCNN1Q92952 543 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 SYT15Q9BQS2 421 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 EHD2Q9NZN4 543 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 CYP8B1Q9UNU6 501 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 APOBEC2Q9Y235 224 aaKnown RBP12.47□□□□□ -0.41
CDK9-205ENST00000498339 SHROOM3Q8TF72 1996 aa12.47□□□□□ -0.41
CDK9-205ENST00000498339 NDUFS2O75306 463 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 GNSP15586 552 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 GABRG2P18507 467 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 UBA7P41226 1012 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 WASP42768 502 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 MAGEA11P43364 429 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 TNFRSF4P43489 277 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 ZNF131P52739 623 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 PREPLQ4J6C6 727 aaPredicted RBP12.46□□□□□ -0.41
CDK9-205ENST00000498339 C10orf76Q5T2E6 689 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 NUDT18Q6ZVK8 323 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 DDX42Q86XP3 938 aaKnown RBP eCLIP12.46□□□□□ -0.41
CDK9-205ENST00000498339 TOP6BLQ8N6T0 577 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 LRRC52Q8N7C0 313 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 C1orf127Q8N9H9 656 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 SAAL1Q96ER3 474 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 PKMYT1Q99640 499 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 IKZF4Q9H2S9 585 aa12.46□□□□□ -0.41
CDK9-205ENST00000498339 DNAAF2Q9NVR5 837 aaKnown RBP12.46□□□□□ -0.41
CDK9-205ENST00000498339 RBAKQ9NYW8 714 aaPredicted RBP12.46□□□□□ -0.41
CDK9-205ENST00000498339 ACACAQ13085 2346 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 IGHV1OR15-9A0A0B4J2B8 117 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 MEI4A8MW99 385 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 TRIM66O15016 1216 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 ATP2C2O75185 946 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 ZNF217O75362 1048 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 CAPNS1P04632 268 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 TMEM191BP0C7N4 346 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 USP46P62068 366 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 SLC7A9P82251 487 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 GAD2Q05329 585 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 SLC14A1Q13336 389 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 POSTNQ15063 836 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 MAPRE1Q15691 268 aaKnown RBP12.45□□□□□ -0.42
CDK9-205ENST00000498339 ANO4Q32M45 955 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 RILPL1Q5EBL4 403 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 LY6G5CQ5SRR4 150 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 SYCP2LQ5T4T6 812 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 RHBDF2Q6PJF5 856 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 VSTM1Q6UX27 236 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 CRELD2Q6UXH1 353 aaPredicted RBP12.45□□□□□ -0.42
CDK9-205ENST00000498339 CCNI2Q6ZMN8 369 aaPredicted RBP12.45□□□□□ -0.42
CDK9-205ENST00000498339 BRSK2Q8IWQ3 736 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 ADGRG2Q8IZP9 1017 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 SETD7Q8WTS6 366 aaKnown RBP12.45□□□□□ -0.42
CDK9-205ENST00000498339 FAM84AQ96KN4 292 aa12.45□□□□□ -0.42
CDK9-205ENST00000498339 SPATA17Q96L03 361 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms