RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 SWAP70Q9UH65 585 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 EIF2B4Q9UI10 523 aaKnown RBP4.21□□□□□ -1.74
CALD1-224ENST00000498254 GJD2Q9UKL4 321 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 NDRG4Q9ULP0 352 aaKnown RBP4.21□□□□□ -1.74
CALD1-224ENST00000498254 DAPP1Q9UN19 280 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 CLCA2Q9UQC9 943 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 ADAMTS20P59510 1910 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 PNMA6EA0A0J9YXQ4 647 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 F5H697 171 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 AGPSO00116 658 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 CD3EAPO15446 510 aaKnown RBP4.2□□□□□ -1.74
CALD1-224ENST00000498254 SOAT2O75908 522 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 SUN1O94901 812 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 VNN1O95497 513 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 GLP2RO95838 553 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 LDHCP07864 332 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 ANXA6P08133 673 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 IFIT1P09914 478 aaKnown RBP4.2□□□□□ -1.74
CALD1-224ENST00000498254 KCNA2P16389 499 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 CNR2P34972 360 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 KRT9P35527 623 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 AARSP49588 968 aaKnown RBP eCLIP4.2□□□□□ -1.74
CALD1-224ENST00000498254 NDUFV1P49821 464 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 PGDP52209 483 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 MPP1Q00013 466 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 OCA2Q04671 838 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 DEPDC1Q5TB30 811 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 AGAP9Q5VTM2 703 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 METRNLQ641Q3 311 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 ABLIM2Q6H8Q1 611 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 TCTN3Q6NUS6 607 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 FOXR2Q6PJQ5 311 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 CLEC9AQ6UXN8 241 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 Q6ZRM9 215 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 SGMS1Q86VZ5 419 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 HERC6Q8IVU3 1022 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 TMEM151BQ8IW70 566 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 RHOT2Q8IXI1 618 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 SLC15A3Q8IY34 581 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 GSPT2Q8IYD1 628 aaKnown RBP4.2□□□□□ -1.74
CALD1-224ENST00000498254 C11orf44Q8N8P7 122 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 SLC30A5Q8TAD4 765 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 POC1BQ8TC44 478 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 SPPL3Q8TCT6 385 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 HIST1H2AAQ96QV6 131 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 TP63Q9H3D4 680 aaPredicted RBP4.2□□□□□ -1.74
CALD1-224ENST00000498254 RNPEPQ9H4A4 650 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 FAM83DQ9H4H8 585 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 UBN1Q9NPG3 1134 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 FSCN3Q9NQT6 498 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 HELLSQ9NRZ9 838 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 DNAJB11Q9UBS4 358 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 CAPN11Q9UMQ6 739 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 ZFR2Q9UPR6 939 aaKnown RBP4.2□□□□□ -1.74
CALD1-224ENST00000498254 DUSP10Q9Y6W6 482 aa4.2□□□□□ -1.74
CALD1-224ENST00000498254 NPEPPSL1A6NEC2 478 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 KIF28PB7ZC32 967 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 FOXS1O43638 330 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 FAM155BO75949 473 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 ZFPL1O95159 310 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 NTSR2O95665 410 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 TBX18O95935 607 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 CSF1RP07333 972 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 CD6P30203 668 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 PRKAR1BP31321 381 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 NPTX2P47972 431 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 EPHB4P54760 987 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 ACTR2P61160 394 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 SP2Q02086 613 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 PDCLQ13371 301 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 E2F2Q14209 437 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 PDCD4Q53EL6 469 aaKnown RBP4.19□□□□□ -1.74
CALD1-224ENST00000498254 RBM20Q5T481 1227 aaKnown RBP4.19□□□□□ -1.74
CALD1-224ENST00000498254 SLFN13Q68D06 897 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 FAAH2Q6GMR7 532 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 SYT13Q7L8C5 426 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 KRT73Q86Y46 540 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 NRSN1Q8IZ57 195 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 FSTL5Q8N475 847 aaPredicted RBP4.19□□□□□ -1.74
CALD1-224ENST00000498254 THAP4Q8WY91 577 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 HERVK_113Q902F9 699 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 MIEF2Q96C03 454 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 RNF31Q96EP0 1072 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 RRP36Q96EU6 259 aaKnown RBP4.19□□□□□ -1.74
CALD1-224ENST00000498254 MCRS1Q96EZ8 462 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 RBM15Q96T37 977 aaKnown RBP eCLIP4.19□□□□□ -1.74
CALD1-224ENST00000498254 PTDSS2Q9BVG9 487 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 GPR87Q9BY21 358 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 CHODLQ9H9P2 273 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 WASH6PQ9NQA3 447 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 TRPM5Q9NZQ8 1165 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 RNF181Q9P0P0 153 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 KCND3Q9UK17 655 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 MAP3K2Q9Y2U5 619 aa4.19□□□□□ -1.74
CALD1-224ENST00000498254 SETD1BQ9UPS6 1966 aaKnown RBP4.18□□□□□ -1.74
CALD1-224ENST00000498254 ADM5C9JUS6 153 aa4.18□□□□□ -1.74
CALD1-224ENST00000498254 E7EVH7 732 aa4.18□□□□□ -1.74
CALD1-224ENST00000498254 TAF5LO75529 589 aa4.18□□□□□ -1.74
CALD1-224ENST00000498254 RPS6KA4O75676 772 aa4.18□□□□□ -1.74
CALD1-224ENST00000498254 RPP40O75818 363 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms