RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 VPS13AQ96RL7 3174 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 ZNF840PA6NDX5 716 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 OTOL1A6NHN0 477 aaPredicted RBP9□□□□□ -0.97
HMGXB4-207ENST00000498212 LILRB5O75023 590 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 RTN3O95197 1032 aaPredicted RBP9□□□□□ -0.97
HMGXB4-207ENST00000498212 ABL1P00519 1130 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 TDGF1P13385 188 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 TRIM21P19474 475 aaKnown RBP9□□□□□ -0.97
HMGXB4-207ENST00000498212 YWHAQP27348 245 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 ASPAP45381 313 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 GCLMP48507 274 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 NDST1P52848 882 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 SATB1Q01826 763 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 PPP3CAQ08209 521 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 GRSF1Q12849 480 aaKnown RBP eCLIP9□□□□□ -0.97
HMGXB4-207ENST00000498212 TAF10Q12962 218 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 CCINQ13939 588 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 ZNF658Q5TYW1 1059 aaPredicted RBP9□□□□□ -0.97
HMGXB4-207ENST00000498212 Q6ZS52 159 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 PAQR9Q6ZVX9 377 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 UNC93AQ86WB7 457 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 CRYBG2Q8N1P7 616 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 SYNPOQ8N3V7 929 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 CPA6Q8N4T0 437 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 SUMF1Q8NBK3 374 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 PDZD8Q8NEN9 1154 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 ENGASEQ8NFI3 743 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 SH3RF2Q8TEC5 729 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 OSCP1Q8WVF1 389 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 OVCA2Q8WZ82 227 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 ATP2A3Q93084 1043 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 FBXO32Q969P5 355 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 EXOC4Q96A65 974 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 SMARCD1Q96GM5 515 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 KCNK16Q96T55 309 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 HINFPQ9BQA5 517 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 ECT2Q9H8V3 914 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 TMEM8AQ9HCN3 771 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 DMAP1Q9NPF5 467 aaPredicted RBP9□□□□□ -0.97
HMGXB4-207ENST00000498212 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9□□□□□ -0.97
HMGXB4-207ENST00000498212 HMGXB4Q9UGU5 601 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 ARHGAP26Q9UNA1 814 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 WNT6Q9Y6F9 365 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 PIEZO1Q92508 2521 aa9□□□□□ -0.97
HMGXB4-207ENST00000498212 LEFTY2O00292 366 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 TRDMT1O14717 391 aaKnown RBP8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 CETN3O15182 167 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 AP1G2O75843 785 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 SMC2O95347 1197 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 OLFM2O95897 454 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 OAS1P00973 400 aaKnown RBP8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 EPB41P11171 864 aaKnown RBP8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 PYGBP11216 843 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 CCDC130P13994 396 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 GJA4P35212 333 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 PRCPP42785 496 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 SLC5A3P53794 718 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 SLC7A9P82251 487 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 ZXDBP98169 803 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 INCA1Q0VD86 236 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 NR1H3Q13133 447 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 ORC1Q13415 861 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 EML3Q32P44 896 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 COBLL1Q53SF7 1204 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 TMEM196Q5HYL7 178 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 KRT39Q6A163 491 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 FUKQ8N0W3 1084 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 CCDC150Q8NCX0 1101 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 TAS1R2Q8TE23 839 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 RUBCNQ92622 972 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 ERCC4Q92889 916 aaPredicted RBP8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 SMARCE1Q969G3 411 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 CHFRQ96EP1 664 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 EEF2KMTQ96G04 330 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 TIGD1Q96MW7 591 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 RNF38Q9H0F5 515 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 EPC1Q9H2F5 836 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 CYP3A43Q9HB55 503 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 APOBEC3GQ9HC16 384 aaKnown RBP8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 KRT82Q9NSB4 513 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 FAM49BQ9NUQ9 324 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 COMMD8Q9NX08 183 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 HOOK1Q9UJC3 728 aaKnown RBP8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 PCDHA5Q9Y5H7 936 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 CPQQ9Y646 472 aa8.99□□□□□ -0.97
HMGXB4-207ENST00000498212 TNFRSF10BO14763 440 aa8.98□□□□□ -0.97
HMGXB4-207ENST00000498212 STX10O60499 249 aa8.98□□□□□ -0.97
HMGXB4-207ENST00000498212 BEST1O76090 585 aa8.98□□□□□ -0.97
HMGXB4-207ENST00000498212 PAPSS2O95340 614 aaPredicted RBP8.98□□□□□ -0.97
HMGXB4-207ENST00000498212 NFATC1O95644 943 aa8.98□□□□□ -0.97
HMGXB4-207ENST00000498212 FAM200BP0CF97 657 aa8.98□□□□□ -0.97
HMGXB4-207ENST00000498212 MBL2P11226 248 aaPredicted RBP8.98□□□□□ -0.97
HMGXB4-207ENST00000498212 DRD1P21728 446 aa8.98□□□□□ -0.97
HMGXB4-207ENST00000498212 GTF2H1P32780 548 aa8.98□□□□□ -0.97
HMGXB4-207ENST00000498212 MXI1P50539 228 aa8.98□□□□□ -0.97
HMGXB4-207ENST00000498212 GALK1P51570 392 aa8.98□□□□□ -0.97
HMGXB4-207ENST00000498212 MCCD1P59942 119 aaPredicted RBP8.98□□□□□ -0.97
HMGXB4-207ENST00000498212 FSTL4Q6MZW2 842 aa8.98□□□□□ -0.97
HMGXB4-207ENST00000498212 DDX42Q86XP3 938 aaKnown RBP eCLIP8.98□□□□□ -0.97
HMGXB4-207ENST00000498212 C12orf29Q8N999 325 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms