RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 CC2D1AQ6P1N0 951 aaPredicted RBP17.68■□□□□ 0.42
ABCF3-218ENST00000498136 CLEC20AQ6ZU45 233 aa17.68■□□□□ 0.42
ABCF3-218ENST00000498136 FAM114A1Q8IWE2 563 aa17.68■□□□□ 0.42
ABCF3-218ENST00000498136 EHBP1Q8NDI1 1231 aa17.68■□□□□ 0.42
ABCF3-218ENST00000498136 PDZD8Q8NEN9 1154 aa17.68■□□□□ 0.42
ABCF3-218ENST00000498136 ZMIZ2Q8NF64 920 aa17.68■□□□□ 0.42
ABCF3-218ENST00000498136 SCAMP5Q8TAC9 235 aa17.68■□□□□ 0.42
ABCF3-218ENST00000498136 LRRC3BQ96PB8 259 aa17.68■□□□□ 0.42
ABCF3-218ENST00000498136 SLC22A12Q96S37 553 aa17.68■□□□□ 0.42
ABCF3-218ENST00000498136 CSNK1G1Q9HCP0 422 aa17.68■□□□□ 0.42
ABCF3-218ENST00000498136 SIT1Q9Y3P8 196 aa17.68■□□□□ 0.42
ABCF3-218ENST00000498136 PCDHB4Q9Y5E5 795 aa17.68■□□□□ 0.42
ABCF3-218ENST00000498136 KIF26AQ9ULI4 1882 aaPredicted RBP17.67■□□□□ 0.42
ABCF3-218ENST00000498136 ZDBF2Q9HCK1 2354 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 KANSL1LA0AUZ9 987 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 ZNF840PA6NDX5 716 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 TNFRSF10BO14763 440 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 DCNP07585 359 aaKnown RBP17.67■□□□□ 0.42
ABCF3-218ENST00000498136 CD19P15391 556 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 PLCB2Q00722 1185 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 HSP90AA4PQ58FG1 418 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 SASS6Q6UVJ0 657 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 ZNF852Q6ZMS4 543 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 RRAGAQ7L523 313 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 TTC8Q8TAM2 541 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 OVCA2Q8WZ82 227 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 PRRX2Q99811 253 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 INTS2Q9H0H0 1204 aaKnown RBP17.67■□□□□ 0.42
ABCF3-218ENST00000498136 KCNH6Q9H252 994 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 FBXO44Q9H4M3 255 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 THAP9Q9H5L6 903 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 COMMD8Q9NX08 183 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 GCNT4Q9P109 453 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 CHORDC1Q9UHD1 332 aaPredicted RBP17.67■□□□□ 0.42
ABCF3-218ENST00000498136 PIAS3Q9Y6X2 628 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 COL4A2P08572 1712 aa17.67■□□□□ 0.42
ABCF3-218ENST00000498136 ACO1P21399 889 aaKnown RBP17.66■□□□□ 0.42
ABCF3-218ENST00000498136 SLC8A3P57103 927 aa17.66■□□□□ 0.42
ABCF3-218ENST00000498136 ZNF268Q14587 947 aaPredicted RBP17.66■□□□□ 0.42
ABCF3-218ENST00000498136 SGO2Q562F6 1265 aa17.66■□□□□ 0.42
ABCF3-218ENST00000498136 TMEM270Q6UE05 265 aa17.66■□□□□ 0.42
ABCF3-218ENST00000498136 ARHGEF19Q8IW93 802 aa17.66■□□□□ 0.42
ABCF3-218ENST00000498136 PJA1Q8NG27 643 aa17.66■□□□□ 0.42
ABCF3-218ENST00000498136 LMO3Q8TAP4 145 aa17.66■□□□□ 0.42
ABCF3-218ENST00000498136 DUSP16Q9BY84 665 aa17.66■□□□□ 0.42
ABCF3-218ENST00000498136 TRPV5Q9NQA5 729 aa17.66■□□□□ 0.42
ABCF3-218ENST00000498136 GKN1Q9NS71 199 aa17.66■□□□□ 0.42
ABCF3-218ENST00000498136 GMIPQ9P107 970 aa17.66■□□□□ 0.42
ABCF3-218ENST00000498136 NDRG2Q9UN36 371 aaKnown RBP17.66■□□□□ 0.42
ABCF3-218ENST00000498136 MRPS17Q9Y2R5 130 aaKnown RBP17.66■□□□□ 0.42
ABCF3-218ENST00000498136 FAM170BA6NMN3 283 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 PES1O00541 588 aaKnown RBP17.65■□□□□ 0.42
ABCF3-218ENST00000498136 MAN2B1O00754 1011 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 PRKCSHP14314 528 aaPredicted RBP17.65■□□□□ 0.42
ABCF3-218ENST00000498136 PFKLP17858 780 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 TNK2Q07912 1038 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 GOLGA7BQ2TAP0 167 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 CCDC183Q5T5S1 534 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 GPRIN1Q7Z2K8 1008 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 IRF2BP1Q8IU81 584 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 SH3RF2Q8TEC5 729 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 KAT5Q92993 513 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 CRACR2AQ9BSW2 395 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 PNPLA8Q9NP80 782 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 LTB4R2Q9NPC1 389 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 GTSE1Q9NYZ3 720 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 HESX1Q9UBX0 185 aa17.65■□□□□ 0.42
ABCF3-218ENST00000498136 ARNTLO00327 626 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 MBL2P11226 248 aaPredicted RBP17.64■□□□□ 0.41
ABCF3-218ENST00000498136 NUBP1P53384 320 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 GCNT1Q02742 428 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 USP4Q13107 963 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 MTF1Q14872 753 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 CT47A1Q5JQC4 288 aaPredicted RBP17.64■□□□□ 0.41
ABCF3-218ENST00000498136 HECTD3Q5T447 861 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 ARHGAP17Q68EM7 881 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 TRIM68Q6AZZ1 485 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 GBP6Q6ZN66 633 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 RBM43Q6ZSC3 357 aaKnown RBP17.64■□□□□ 0.41
ABCF3-218ENST00000498136 UBR7Q8N806 425 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 PRSS33Q8NF86 280 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 FAM3CQ92520 227 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 DDX23Q9BUQ8 820 aaKnown RBP17.64■□□□□ 0.41
ABCF3-218ENST00000498136 NACA2Q9H009 215 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 RNF38Q9H0F5 515 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 C8orf33Q9H7E9 229 aaPredicted RBP17.64■□□□□ 0.41
ABCF3-218ENST00000498136 UBE2TQ9NPD8 197 aaPredicted RBP17.64■□□□□ 0.41
ABCF3-218ENST00000498136 TLR8Q9NR97 1041 aaKnown RBP17.64■□□□□ 0.41
ABCF3-218ENST00000498136 SMPD4Q9NXE4 827 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 IL37Q9NZH6 218 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 TSPAN16Q9UKR8 245 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 ARHGAP26Q9UNA1 814 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 MTF2Q9Y483 593 aaPredicted RBP17.64■□□□□ 0.41
ABCF3-218ENST00000498136 CPQQ9Y646 472 aa17.64■□□□□ 0.41
ABCF3-218ENST00000498136 HHLA1C9JL84 531 aa17.63■□□□□ 0.41
ABCF3-218ENST00000498136 NCAM2O15394 837 aa17.63■□□□□ 0.41
ABCF3-218ENST00000498136 CYP26A1O43174 497 aa17.63■□□□□ 0.41
ABCF3-218ENST00000498136 GALR2O43603 387 aaPredicted RBP17.63■□□□□ 0.41
ABCF3-218ENST00000498136 OAS1P00973 400 aaKnown RBP17.63■□□□□ 0.41
ABCF3-218ENST00000498136 VDRP11473 427 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms