RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 ARHGAP15Q53QZ3 475 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 HSP90AA4PQ58FG1 418 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 TCP11X2Q5H9J9 407 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 MIIPQ5JXC2 388 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 TRIM65Q6PJ69 517 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 DENND5BQ6ZUT9 1274 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 PPM1KQ8N3J5 372 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 SLC44A3Q8N4M1 653 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 SLC4A11Q8NBS3 891 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 ZSCAN18Q8TBC5 510 aaPredicted RBP11.92□□□□□ -0.5
ERCC8-208ENST00000497892 SMARCD2Q92925 531 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 CYFIP2Q96F07 1278 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 TMEM176AQ96HP8 235 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 ZSWIM3Q96MP5 696 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 KCNK16Q96T55 309 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 HNRNPABQ99729 332 aaKnown RBP11.92□□□□□ -0.5
ERCC8-208ENST00000497892 TUBGCP2Q9BSJ2 902 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 TTLL2Q9BWV7 592 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 ATXN3LQ9H3M9 355 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 SLITRK6Q9H5Y7 841 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 TRPV4Q9HBA0 871 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 CSNK1G1Q9HCP0 422 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 C11orf16Q9NQ32 467 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 EHD2Q9NZN4 543 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 ZMYM5Q9UJ78 669 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 MAGED2Q9UNF1 606 aaPredicted RBP11.92□□□□□ -0.5
ERCC8-208ENST00000497892 DUSP12Q9UNI6 340 aa11.92□□□□□ -0.5
ERCC8-208ENST00000497892 HELZP42694 1942 aaKnown RBP11.92□□□□□ -0.5
ERCC8-208ENST00000497892 SOBPA7XYQ1 873 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 AP1G2O75843 785 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 FAM200BP0CF97 657 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 ADORA2BP29275 332 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 USP46P62068 366 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 SIGLEC14Q08ET2 396 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 VWA3BQ502W6 1294 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 GPR158Q5T848 1215 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 PHLDB3Q6NSJ2 640 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 GBP6Q6ZN66 633 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 TRIM67Q6ZTA4 783 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 CLEC20AQ6ZU45 233 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 ARHGEF19Q8IW93 802 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 ZMIZ2Q8NF64 920 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 ST13P5Q8NFI4 369 aaPredicted RBP11.91□□□□□ -0.5
ERCC8-208ENST00000497892 KAT5Q92993 513 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 JAKMIP2Q96AA8 810 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 ELSPBP1Q96BH3 223 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 HEXIM2Q96MH2 286 aaKnown RBP11.91□□□□□ -0.5
ERCC8-208ENST00000497892 SMOQ99835 787 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 KXD1Q9BQD3 176 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 CRACR2AQ9BSW2 395 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 RPP25Q9BUL9 199 aaKnown RBP11.91□□□□□ -0.5
ERCC8-208ENST00000497892 C1QTNF1Q9BXJ1 281 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 NDST4Q9H3R1 872 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 TASP1Q9H6P5 420 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 COL4A2P08572 1712 aa11.91□□□□□ -0.5
ERCC8-208ENST00000497892 TNFRSF10BO14763 440 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 NARSO43776 548 aaKnown RBP11.9□□□□□ -0.5
ERCC8-208ENST00000497892 BEST1O76090 585 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 RTN3O95197 1032 aaPredicted RBP11.9□□□□□ -0.5
ERCC8-208ENST00000497892 SRFP11831 508 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 PRKCSHP14314 528 aaPredicted RBP11.9□□□□□ -0.5
ERCC8-208ENST00000497892 NPR3P17342 541 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 DDX6P26196 483 aaKnown RBP eCLIP11.9□□□□□ -0.5
ERCC8-208ENST00000497892 WEE1P30291 646 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 SLC5A3P53794 718 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 NCAPHQ15003 741 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 EXOC3L4Q17RC7 722 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 ANO6Q4KMQ2 910 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 PPP1R26Q5T8A7 1209 aaPredicted RBP11.9□□□□□ -0.5
ERCC8-208ENST00000497892 ARHGAP17Q68EM7 881 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 TANGO2Q6ICL3 276 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 RRAGAQ7L523 313 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 NUP93Q8N1F7 819 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 MRPS31Q92665 395 aaKnown RBP11.9□□□□□ -0.5
ERCC8-208ENST00000497892 ASIC4Q96FT7 647 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 KREMEN1Q96MU8 473 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 BPIFA3Q9BQP9 254 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 FUCA2Q9BTY2 467 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 SLC46A2Q9BY10 475 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 NAT10Q9H0A0 1025 aaKnown RBP11.9□□□□□ -0.5
ERCC8-208ENST00000497892 ZFP14Q9HCL3 533 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 PNPLA8Q9NP80 782 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 SLC2A4RGQ9NR83 387 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 FANCLQ9NW38 375 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 APEX2Q9UBZ4 518 aa11.9□□□□□ -0.5
ERCC8-208ENST00000497892 NCANO14594 1321 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 FAM92AA1XBS5 289 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 LCE2BO14633 110 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 GPR37L1O60883 481 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 LETM1O95202 739 aaPredicted RBP11.89□□□□□ -0.51
ERCC8-208ENST00000497892 PRAMEF12O95522 483 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 PAEPP09466 180 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 SLC9A1P19634 815 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 FECHP22830 423 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 PON1P27169 355 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 PPP3CCP48454 512 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 ZNF132P52740 706 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 MAP3K7CLP57077 242 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 KRT31Q15323 416 aa11.89□□□□□ -0.51
ERCC8-208ENST00000497892 SGO2Q562F6 1265 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms