RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 TNFAIP3P21580 790 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 PRKCIP41743 596 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 PLA2G4AP47712 749 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 TKTL1P51854 596 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 ADIGQ0VDE8 80 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 PABPC1LQ4VXU2 614 aaKnown RBP12.55□□□□□ -0.4
CUX1-210ENST00000497815 ATAT1Q5SQI0 421 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 NAA35Q5VZE5 725 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 HGSNATQ68CP4 663 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 PDZD4Q76G19 769 aaPredicted RBP12.55□□□□□ -0.4
CUX1-210ENST00000497815 ZNF571Q7Z3V5 609 aaPredicted RBP12.55□□□□□ -0.4
CUX1-210ENST00000497815 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.55□□□□□ -0.4
CUX1-210ENST00000497815 WDTC1Q8N5D0 677 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 SMRP1Q8NCR6 262 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 TMEM35BQ8NCS4 154 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 SLC35F5Q8WV83 523 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 CPA5Q8WXQ8 436 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 RIPOR3Q96MK2 946 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 PCDHB18PQ96TA0 734 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.55□□□□□ -0.44e-6■■■■□ 23.2
CUX1-210ENST00000497815 LHX5Q9H2C1 402 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 LRRC4Q9HBW1 653 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 COG5Q9UP83 839 aa12.55□□□□□ -0.4
CUX1-210ENST00000497815 USP15Q9Y4E8 981 aaPredicted RBP12.55□□□□□ -0.4
CUX1-210ENST00000497815 REV3LO60673 3130 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 GRXCR2A6NFK2 248 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 TMCO5BA8MYB1 307 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 RTN3O95197 1032 aaPredicted RBP12.54□□□□□ -0.4
CUX1-210ENST00000497815 ABL1P00519 1130 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 POU2F2P09086 479 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 YWHAQP27348 245 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 GABRR2P28476 465 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 TAF10Q12962 218 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 PDCLQ13371 301 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 MEA1Q16626 185 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 SLC5A9Q2M3M2 681 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 CYP4A22Q5TCH4 519 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 WDR59Q6PJI9 974 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 TMC8Q8IU68 726 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 SIX6OS1Q8N1H7 587 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 TC2NQ8N9U0 490 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 SLC30A5Q8TAD4 765 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 ING5Q8WYH8 240 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 FBXO32Q969P5 355 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 TCEAL4Q96EI5 215 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 CEP295NLQ96MC4 621 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 NOX5Q96PH1 765 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 GCNAQ96QF7 691 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 ULBP1Q9BZM6 244 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 UBXN6Q9BZV1 441 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 MIS12Q9H081 205 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 PNPLA8Q9NP80 782 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 EHD2Q9NZN4 543 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 ARHGAP20Q9P2F6 1191 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 TJP2Q9UDY2 1190 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 BZW2Q9Y6E2 419 aaKnown RBP12.54□□□□□ -0.4
CUX1-210ENST00000497815 PTPRDP23468 1912 aa12.54□□□□□ -0.4
CUX1-210ENST00000497815 MTCL1Q9Y4B5 1905 aaKnown RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 A0A1W2PRU2 124 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 GOLGA6L6A8MZA4 724 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 E5RJQ4 531 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 NRG2O14511 850 aaPredicted RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 MBTPS2O43462 519 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 GABBR2O75899 941 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 LSM8O95777 96 aaKnown RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 USP17L7P0C7H9 530 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 FSHRP23945 695 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 HNRNPH3P31942 346 aaKnown RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 EIF4A3P38919 411 aaKnown RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 CCR2P41597 374 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 MTHFRP42898 656 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 KIF11P52732 1056 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 NOMO3P69849 1222 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 CYP4F8P98187 520 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 SMAD4Q13485 552 aaKnown RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 CBX2Q14781 532 aaPredicted RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 ARID5BQ14865 1188 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 CLEC16AQ2KHT3 1053 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 LEXMQ3ZCV2 418 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 C2CD6Q53TS8 623 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 RAB41Q5JT25 222 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 CYP26C1Q6V0L0 522 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 TRIM72Q6ZMU5 477 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 GET4Q7L5D6 327 aaPredicted RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 SCUBE3Q8IX30 993 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 OLIG1Q8TAK6 271 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 KCTD13Q8WZ19 329 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 NDRG1Q92597 394 aaKnown RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 ANP32BQ92688 251 aaKnown RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 TRMT2BQ96GJ1 504 aaKnown RBP12.53□□□□□ -0.4
CUX1-210ENST00000497815 PPP1R13BQ96KQ4 1090 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 HSFY1Q96LI6 401 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 SLITRK1Q96PX8 696 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 CPXM1Q96SM3 734 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 SYT11Q9BT88 431 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 TTLL2Q9BWV7 592 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 LRRC3Q9BY71 257 aa12.53□□□□□ -0.4
CUX1-210ENST00000497815 ATXN3LQ9H3M9 355 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms